| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1251009 = | 18 (0.780) | 3 (0.140) | 3/234 | NT | 16.7% | coding (268/549 nt) | PP_1093 | electron transport complex protein |
| ? | NC_002947 | 1251060 = | 13 (0.600) | coding (217/549 nt) | PP_1093 | electron transport complex protein | |||||
TTGGCGGCTGGCGCCCAGCAGCAGGCAAATGGCAAAGACAGCGCCGAGGTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAG > NC_002947/1250863‑1251156 | ttGGCGGCTGGCGCCCAGCAGCAGGCAAATGGCAAAGACAGCGCCGAGGTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGc > 1:175059/1‑150 (MQ=255) acccgaacgctggctgaaggcgcggccatcggcctgtgcgcagtactgatggggtgcctgcaccaactgttgctggcgccacagcgtaaacacatggccagctgggcctatgtactggctagcctgttgctgctggcagcctTGGCCAGt < 1:221004‑M1/8‑1 (MQ=255) gcCCAGCAGCAGGCAAATGGCAAAGACAGCGCCGAGGTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTagcag > 1:408192/1‑150 (MQ=255) ccAGCAGCAGGCAAATGGCAAAGACAGCGCCGAGGTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGcc > 1:201128/1‑150 (MQ=255) agGCAAATGGCAAAGACAGCGCCGAGGTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGc > 2:582035/1‑150 (MQ=255) cAAATGGCAAAGACAGCGCCGAGGTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACCACGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAgg < 1:15666/150‑1 (MQ=255) gAGGTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGc > 2:521131/1‑150 (MQ=255) gTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCACCTGCAGGCAACTGGCCaa > 2:266796/1‑150 (MQ=255) gTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCaa < 1:590087/150‑1 (MQ=255) gTGCCTTCCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGCGGTCTGATAGTAGTGATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCaa < 2:324584/150‑1 (MQ=255) actgatggggtgcctgcaccaactgttgctggcgccactgcgtaaacacatggccagctgggcctatgtactggctagcctgttgctgctggcagcctTGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGTCaa > 1:150200‑M1/99‑150 (MQ=255) tGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGc < 2:231483/150‑1 (MQ=255) gcgcCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCa > 1:125500/1‑102 (MQ=255) gcgcCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCa < 2:125500/102‑1 (MQ=255) gcgcCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCaa < 2:201128/150‑1 (MQ=255) actgttgctggcgccactgcgtaaacacatggccagctgggcctatgtactggctagcctgttgctgctggcagcctTGGCCa > 1:230869‑M1/78‑83 (MQ=255) actgttgctggcgccactgcgtaaacacatggccagctgggcctatgtactggctagcctgttgctgctggcagcctTGGCCa < 2:230869‑M1/6‑1 (MQ=255) aGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGcc < 1:21190/150‑1 (MQ=255) gtggtCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCt > 2:221004/1‑150 (MQ=255) tggtCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTg > 1:301382/1‑150 (MQ=255) ggccagctgggcctatgtactggctagcctgttgctgctggcagcctTGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTg < 2:605443‑M1/47‑1 (MQ=255) ggccagctgggcctatgtactggctagcctgttgctgctggcagcctTGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTg > 1:605443‑M1/48‑94 (MQ=255) aacaaTGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTg > 2:504992/1‑142 (MQ=255) aacaaTGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTg < 1:504992/142‑1 (MQ=255) ccAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCAcc < 1:521131/150‑1 (MQ=255) ggCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCAt < 1:148428/150‑1 (MQ=255) aaTGGCCAGTGGTAGCAGACAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAg > 2:257681/1‑150 (MQ=255) | TTGGCGGCTGGCGCCCAGCAGCAGGCAAATGGCAAAGACAGCGCCGAGGTGCCTTGCGAGCAGGCGCCAGCGGCGTTGGTCAGGTAGCAGGTGGTCACTGGCCAGGCATTGCAGGCACAACAATGCGGGATAGTGGCCCAGGGCAATGGCCAGTGGTAGCAGCCAGGCCCGCAGGGCCAACTGCAGGCAACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAG > NC_002947/1250863‑1251156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |