New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1394321 = | 21 (0.910) | 3 (0.140) | 3/236 | NT | 15.5% | coding (52/1047 nt) | ruvB | Holliday junction ATP‑dependent DNA helicase RuvB |
? | NC_002947 | 1394357 = | 13 (0.600) | coding (88/1047 nt) | ruvB | Holliday junction ATP‑dependent DNA helicase RuvB |
TTGCCCAGGCCGGGCGGGCCGAAGATCAGCGTGTGGTCAAGCGACTCGCCGCGGCCGCGGGCGGCCTGGATGAACAGCGCCATCTGCTCGCGCACCACCGGCTGGCCGATGTACTCGTCCAGGCTCAGCGGGCGAATCGCACGGTCCTGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1394472‑1394321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggacGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTGGGCAAGACCACCCTGGCCAACATCATCGCCCATGAAA > NC_002947/1394357‑1394504 TTGCCCAGGCCGGGCGGGCCGAAGATCAGCGTGTGGTCAAGCGACTCGCCGCGGCCGCGGGCGGCCTGGATGAACAGCGCCATCTGCTCGCGCACCACCGGCTGGCCGATGTACTCGTCCAGGCTCAGCGGGCGAATCGCACGGTCCTGG < 2:480975/150‑1 TCGTCCAGGCTCAGCGGGCGAATCGCACGGTCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTGG > 2:15203/1‑150 TCCAGGCTCAGCGGGCGAATCGCACGGTCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGA > 1:569683/1‑64 TCCAGGCTCAGCGGGCGAATCGCACGGTCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGA < 2:569683/64‑1 ACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTGGGCAAGACCACCCTGGCCAACATCATCGCCCATGAAA < 1:47087/150‑1 TTGCCCAGGCCGGGCGGGCCGAAGATCAGCGTGTGGTCAAGCGACTCGCCGCGGCCGCGGGCGGCCTGGATGAACAGCGCCATCTGCTCGCGCACCACCGGCTGGCCGATGTACTCGTCCAGGCTCAGCGGGCGAATCGCACGGTCCTGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1394472‑1394321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggacGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTGGGCAAGACCACCCTGGCCAACATCATCGCCCATGAAA > NC_002947/1394357‑1394504 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |