| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1394321 = | 21 (0.910) | 3 (0.140) | 3/236 | NT | 15.5% | coding (52/1047 nt) | ruvB | Holliday junction ATP‑dependent DNA helicase RuvB |
| ? | NC_002947 | 1394357 = | 13 (0.600) | coding (88/1047 nt) | ruvB | Holliday junction ATP‑dependent DNA helicase RuvB | |||||
CGCAGGAAGCCAGCAAGGCAATCGCCGCGATCAAGGACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCG > NC_002947/1394173‑1394462 | tttcatgggcgatgatgttggccagggtggtcttgcccaggccgggcgggccgaagatcagcgtgtggtcaagcgactcgccgcggccgcgggcggcctggatgaacagcgccatctgctcgcgcaccaccggctggccgatgtactcGt < 1:47087‑M1/2‑1 (MQ=255) cAGGAAGCCAGCAAGGCAATCGCCGCGATCAAGGACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTcc < 1:26073/150‑1 (MQ=255) ggAAGCCAGCAAGGCAATCGCCGCGATCAAGGACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAg < 2:187738/150‑1 (MQ=255) gccgcAATCAAGGACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGc < 1:501226/150‑1 (MQ=255) gcgATCAAGGACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGa < 1:283427/150‑1 (MQ=255) gATCAAGGACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGc < 2:232301/150‑1 (MQ=255) ggACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGAc < 2:204277/150‑1 (MQ=255) ccaggccgggcgggccgaagatcagcgtgtggtcaagcgactcgccgcggccgcgggcggcctggatgaacagcgccatctgctcgcgcaccaccggctggccgatgtactcGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGa > 2:15203‑M1/113‑150 (MQ=255) aCAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGa > 1:124432/1‑150 (MQ=255) aGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTa > 2:47087/1‑150 (MQ=255) gccTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCgg > 1:7346/1‑150 (MQ=255) gagCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTgc < 2:74336/150‑1 (MQ=255) aTCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGc > 2:408672/1‑150 (MQ=255) gCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCt < 1:408672/150‑1 (MQ=255) ggatTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGgc > 2:105255/2‑150 (MQ=255) tCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGccgccc < 1:42416/150‑1 (MQ=255) cGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCtt < 2:19713/150‑1 (MQ=255) gCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGa < 2:176839/142‑1 (MQ=255) gCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGa > 1:176839/1‑142 (MQ=255) cTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGAc < 2:124432/150‑1 (MQ=255) tcgcgcaccaccggctggccgatgtactcGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGa > 1:569683‑M1/30‑64 (MQ=255) tcgcgcaccaccggctggccgatgtactcGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGa < 2:569683‑M1/35‑1 (MQ=255) gccAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTg > 1:242506/1‑150 (MQ=255) cAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGa < 1:423209/38‑1 (MQ=255) cAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGa > 2:423209/1‑38 (MQ=255) gcgaAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGcccgcccg > 1:583698/1‑150 (MQ=255) | CGCAGGAAGCCAGCAAGGCAATCGCCGCGATCAAGGACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCG > NC_002947/1394173‑1394462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |