New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1551725 = | 33 (1.430) | 3 (0.140) | 3/234 | NT | 9.4% | coding (1139/1455 nt) | pykA | pyruvate kinase II |
? | NC_002947 | 1551778 = | 27 (1.250) | coding (1086/1455 nt) | pykA | pyruvate kinase II |
CAGGCCATGGCACGCATCTGCCTGGGTGCCGAAAAGCACCCGACCAGCCAGAAGTCCAGCCATCGCCTGCACACCACCTTCCAGCGCTGCGACGAAAGCATCGCCTTGGCGGCCATGTACACTGCCAACCACTTCCCGGGCGTAAAGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1551876‑1551725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggcgatGCTTTCGTCGCAGCGCTGGAAGGTGGTGTGCAGGCGATGGCTGGACTTCTGGCTGGTCGGGTGCTTTTCGGCACCCAGGCAGATGCGTGCCATGGC > NC_002947/1551778‑1551873 CAGGCCATGGCACGCATCTGCCTGGGTGCCGAAAAGCACCCGACCAGCCAGAAGTCCAGCCATCGCCTGCACACCACCTTCCAGCGCTGCGACGAAAGCATCGCCTTGGCGGCCATGTACACTGCCAACCACTTCCCGGGCGTAAAGGCG > 2:139080/1‑150 CGACGAAAGCATCGCCTTGGCGGCCATGTACACTGCCAACCACTTCCCGGGCGTAAAGGCGATGCTTTCGTCGCAGCGCTGGAAGGTGGTGTGCAGGCGATGGCT < 1:189430/105‑1 CGACGAAAGCATCGCCTTGGCGGCCATGTACACTGCCAACCACTTCCCGGGCGTAAAGGCGATGCTTTCGTCGCAGCGCTGGAAGGTGGTGTGCAGGCGATGGCT > 2:189430/1‑105 CATCGCCTTGGCGGCCATGTACACTGCCAACCACTTCCCGGGCGTAAAGGCGATGCTTTCGTCGCAGCGCTGGAAGGTGGTGTGCAGGCGATGGCTGGACTTCTGGCTGGTCGGGTGCTTTTCGGCACCCAGGCAGATGCGTGCCATGGC > 2:402293/1‑150 CAGGCCATGGCACGCATCTGCCTGGGTGCCGAAAAGCACCCGACCAGCCAGAAGTCCAGCCATCGCCTGCACACCACCTTCCAGCGCTGCGACGAAAGCATCGCCTTGGCGGCCATGTACACTGCCAACCACTTCCCGGGCGTAAAGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1551876‑1551725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggcgatGCTTTCGTCGCAGCGCTGGAAGGTGGTGTGCAGGCGATGGCTGGACTTCTGGCTGGTCGGGTGCTTTTCGGCACCCAGGCAGATGCGTGCCATGGC > NC_002947/1551778‑1551873 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |