New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1053240 = | 29 (1.250) | 5 (0.230) | 3/240 | NT | 15.9% | coding (130/1428 nt) | PP_0910 | hypothetical protein |
? | NC_002947 | 1053338 = | 25 (1.130) | coding (32/1428 nt) | PP_0910 | hypothetical protein |
AACAACGGGCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGT > NC_002947/1053092‑1053385 | aacaacGGGCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTcgctgcgc < 1:90477/150‑1 (MQ=255) aacGGGCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCgctgcgctgc > 2:131973/1‑150 (MQ=255) gggCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑Cg > 2:187542/1‑150 (MQ=255) ccAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCg > 1:589588/1‑150 (MQ=255) cAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGc > 2:341706/1‑150 (MQ=255) cATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGATAGCAGCTCGGCA‑‑CGG‑‑TCGCCTGGc > 1:340182/1‑150 (MQ=255) ttGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGc < 1:187542/150‑1 (MQ=255) gcAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCg > 1:45656/1‑150 (MQ=255) ttcaatgatcctgggcctgctaagctgcacgccggtttttcgctcacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCTGGCCT‑‑TGGCCTGGCCACCCGACAACGCTTCGCCGGGc < 2:531376‑M1/43‑1 (MQ=255) ttcaatgatcctgggcctgctaagctgcacgccggtttttcgctcacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCT‑‑GGCCTTGGCCTGGCCACCCGACAACGCTTCGCCGGGc > 1:531376‑M1/94‑136 (MQ=255) cGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCggg < 2:589588/150‑1 (MQ=255) aaaGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTgg < 1:106023/136‑1 (MQ=255) aaaGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTgg > 2:106023/1‑136 (MQ=255) tGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTcac > 1:591471/1‑150 (MQ=255) tACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAgg < 2:564117/150‑1 (MQ=255) ccACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGcgtcgt < 1:233829/141‑1 (MQ=255) ccACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGcgtcgt > 2:233829/1‑141 (MQ=255) gctgcacgccggtttttcgctcacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCA‑‑CGG‑‑TAGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggcc < 1:10910‑M1/80‑1 (MQ=255) aCGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggcc < 1:48713/150‑1 (MQ=255) aCGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggcc > 2:177946/1‑150 (MQ=255) aCGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggcc > 2:121923/1‑150 (MQ=255) gCGAAGTCCAGGCGTAGCTCTGGCGAGGGGTTGGCCGAGGGCAGGGAATATGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggccaag < 2:109840/150‑1 (MQ=255) gCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCggccaag < 2:45656/150‑1 (MQ=255) cacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCaga > 1:40172‑M1/50‑150 (MQ=255) ggCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAggg < 2:340182/150‑1 (MQ=255) gcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAggg > 2:10910‑M1/47‑150 (MQ=255) gTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCg > 2:474101/1‑150 (MQ=255) ttGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCgg < 1:131973/150‑1 (MQ=255) ggCAGTGAATATGCTTTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TAGCCAGGCTGGCTGTGGCCGCACGGGCGCATTCTTCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGAc < 1:228380/150‑1 (MQ=255) ggCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCga < 2:591471/150‑1 (MQ=255) ggCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCga < 1:287948/150‑1 (MQ=255) gCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCgag > 2:231574/1‑150 (MQ=255) aTTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACaa < 2:103012/138‑1 (MQ=255) aTTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACaa > 1:103012/1‑138 (MQ=255) gTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTgg < 1:121923/150‑1 (MQ=255) tCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTggg < 1:341706/150‑1 (MQ=255) ctgcgctgcA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGt < 2:167496/150‑1 (MQ=255) | AACAACGGGCCCAGACCATCACGCGCGGTGGTGGTTGACGGCGCAATCACCCAAGGGTTGCGAAAGAAGCTGTTACCCACGGCGAAGTCCAGGCGTAGCTCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCA‑‑CGG‑‑TCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGT > NC_002947/1053092‑1053385 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |