New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1053240 = | 29 (1.250) | 5 (0.230) | 3/240 | NT | 15.9% | coding (130/1428 nt) | PP_0910 | hypothetical protein |
? | NC_002947 | 1053338 = | 25 (1.130) | coding (32/1428 nt) | PP_0910 | hypothetical protein |
TCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGTTGC > NC_002947/1053191‑1053478 | cacgcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCaga > 1:40172‑M1/50‑150 (MQ=255) ggCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAggg < 2:340182/150‑1 (MQ=255) gcccaggattctcgatgtccttgtcgctgtcccgactcccccctctGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAggg > 2:10910‑M1/47‑150 (MQ=255) gTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCg > 2:474101/1‑150 (MQ=255) ttGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCgg < 1:131973/150‑1 (MQ=255) ggCAGTGAATATGCTTTGCGGTCGCTGCGCTGCACGGTAGCCAGGCTGGCTGTGGCCGCACGGGCGCATTCTTCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGAc < 1:228380/150‑1 (MQ=255) ggCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCga < 2:591471/150‑1 (MQ=255) ggCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCga < 1:287948/150‑1 (MQ=255) gCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCgag > 2:231574/1‑150 (MQ=255) aTTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACaa > 1:103012/1‑138 (MQ=255) aTTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACaa < 2:103012/138‑1 (MQ=255) gTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTgg < 1:121923/150‑1 (MQ=255) tCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTggg < 1:341706/150‑1 (MQ=255) ccctctgctgctggccttggccttggccgcctgtgacgacgccccgcgcttcacccacgccgagcccggcgaagcgttgtcgggtggccaggcgaccgtgcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGc > 2:10910‑M2/105‑150 (MQ=255) ctgcgctgcACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGt < 2:167496/150‑1 (MQ=255) tctgctgctggccttggccttggccgcctgtgacgacgccccgcgcttcacccacgccgagcccggcgaagcgttgtcgggtggccaggcgaccgtgcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTg > 1:40172‑M2/102‑150 (MQ=255) ggccgcctgtgacgacgccccgcgcttcacccacgccgagcccggcgaagcgttgtcgggtggccaggctaccgtgcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGc < 1:10910‑M2/70‑1 (MQ=255) gCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGTCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGccc > 2:536826/1‑150 (MQ=255) gCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGGCAGCGACAAGGACATCGAGAAACCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGccc > 2:43442/1‑150 (MQ=255) gggCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCa > 2:19044/1‑137 (MQ=255) gggCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCa < 1:19044/137‑1 (MQ=255) ggCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGACCAGGATCAtt > 2:425904/1‑150 (MQ=255) gTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGAc > 1:83233/1‑72 (MQ=255) gTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGAc < 2:83233/72‑1 (MQ=255) aaGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAAttt > 2:15224/1‑150 (MQ=255) gcgcGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGTCCAGGATCATTGAATAAGAGCAATTTGc > 1:453219/1‑150 (MQ=255) gcccggcgaagcgttgtcgggtggccaggccaaggccagcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGaa > 1:531376‑M2/44‑136 (MQ=255) gcccggcgaagcgttgtcgggtggccaggccaaggccagcagcAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGaa < 2:531376‑M2/93‑1 (MQ=255) tcgtcACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAACAACGGGCTTGCAGCTGAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTtga < 1:231574/150‑1 (MQ=255) ccaaggccaGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGcgcg > 2:514941/1‑150 (MQ=255) aaggccaGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGt < 1:514941/150‑1 (MQ=255) aaggccaGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGt > 2:505684/1‑150 (MQ=255) gccaGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGTTGc < 2:453219/150‑1 (MQ=255) | TCTGGCGAGAGGTTGGCCGAGGGCAGGGAATAGGCATTGCGGTCGCTGCGCTGCACGGTCGCCTGGCCACCCGACAACGCTTCGCCGGGCTCGGCGTGGGTGAAGCGCGGGGCGTCGTCACAGGCGGCCAAGGCCAAGGCCAGCAGCAGAGGGGGGAGTCGGGACAGCGACAAGGACATCGAGAATCCTGGGCGTGAGCGAAAAACCGGCGTGCAGCTTAGCAGGCCCAGGATCATTGAATAAGAGCAATTTGCGTTTGCTTGATGAAATCGCTGCCAGCGCGGTTGC > NC_002947/1053191‑1053478 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |