New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	261875 =	116 (1.240)	8 (0.090)	7/250	NT	6.3%	coding (357/966 nt)	PP_0210	phycobiliprotein
	?	NC_002947	261905 =	121 (1.300)					coding (387/966 nt)	PP_0210	phycobiliprotein

CTCCAGGCGCAGCTCGCGCAAGGCACGTAGGGCACTGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/261917‑261875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGGCGCTGGCCGATGACGCCGCCGCCGTACGGCGTGAGGCAGTGGGCATTCTTGGCTGGCTCAAGCACCAGCCGGCGTTGCTGGCGCTGGCAG  >  NC_002947/261905‑262032                                                                                                                                                                             CTCCAGGCGCAGCTCGCGCAAGGCACGTAGGGCACTGGCGCGGGCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGGCGCTGGCCGATGACGCCGCCGCCGTACGGCGTGAGGCAGTGGGCATTCTTGGCTGGCTCAAGCACCAGC                       >  1:487885/1‑150 CTCCAGGCGCAGCTCGCGCAAGGCACGTAGGGCACTGGCGCGGGCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGGCGCTGGCCGATGACGCCGCCGCCGTACGGCGTGA                                                          <  1:1640295/115‑1 CTCCAGGCGCAGCTCGCGCAAGGCACGTAGGGCACTGGCGCGGGCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGGCGCTGGCCGATGACGCCGCCGCCGTACGGCGTGA                                                          >  2:1640295/1‑115    CAGGCGCAGCTCGCGCAAGGCACGTAGGGCACTGGCGCGGGCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGG                                                                                            >  1:309804/1‑78    CAGGCGCAGCTCGCGCAAGGCACGTAGGGCACTGGCGCGGGCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGG                                                                                            <  2:309804/78‑1     AGGCGCAGCTCGCGCAAGGCACGTAGGGCACTGGCGCGGGCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGGCGCTGGCCGATGACGCCGCCGCCGTACGGCGTGAGGCAGTGGGCATTCTTGGCTGGCTCAAGCACCAGCCGGC                   >  2:2331303/1‑150              TCGCGCAAGGCACGTAGGGCACTGGCGCGAGCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGGCGCTGGCCTATGACGCCGCCGCCGTACGGCGTGAGGCAGTGGGCATTCATGGCTGGCTCAAGCACCAGCCGGCGTTGCTGGC          >  2:1235403/1‑150                      GGCACGTAGGGCACTGGCGCGGGCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGGCGCTGGCCGATGACGCCGCCGCCGTACGGCGTGAGGCAGTGGGCATTCTTGGCTGGCTCAAGCACCAGCCGGCGTTGCTGGCGCTGGCAG  <  1:2331303/150‑1                                                                                                                                                                             CTCCAGGCGCAGCTCGCGCAAGGCACGTAGGGCACTGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/261917‑261875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGCGCCTGGAGGATGCTGCCGACCCTGCGCTGCTGGCGCTGGCCGATGACGCCGCCGCCGTACGGCGTGAGGCAGTGGGCATTCTTGGCTGGCTCAAGCACCAGCCGGCGTTGCTGGCGCTGGCAG  >  NC_002947/261905‑262032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.