New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 530833 = | 105 (1.130) | 5 (0.050) | 4/244 | NT | 5.0% | coding (744/960 nt) | birA | bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
? | NC_002947 | 530860 = | 87 (0.960) | coding (771/960 nt) | birA | bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
CCTCAAGGCGCAAACCACCCTGCCCGTCGACGCCAAGAACCACGCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCG‑TAGCGGCGATGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530984‑530833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGAAAAGAGCTTCA > NC_002947/530860‑531008 CCTCAAGGCGCAAACCACCCTGCCCGTCGACGCCAAGAACCACGCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCG‑TAGCGGCGATGAC < 2:942411/150‑1 CTCAAGGCGCAAACCACCCTGCCCGTCGACGCCAAGAACCACGCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCG‑TAGCGGCGATGACG > 1:2087806/1‑150 CCTGCCCGTCGACGCCAAGAACCACGCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGTCATCGCCGCTA‑CGGCTTTGCCGCATTCCAGGAGGAGTGG < 1:7686/150‑1 TGGAATGCGGCAAAGCCG‑TAGCGGCGATGACGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCG > 1:477275/1‑150 TGGAATGCGGCAAAGCCG‑TAGCGGCGATGACGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGT < 1:392895/117‑1 TGGAATGCGGCAAAGCCG‑TAGCGGCGATGACGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGT > 2:392895/1‑117 G‑TAGCGGCGATGACGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGA < 2:7686/150‑1 GACGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGAAAAGAGC < 2:477275/150‑1 CGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGAAAAGAGCTT > 1:1266303/1‑150 CGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGA < 1:1772287/137‑1 CGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGA > 2:1772287/1‑137 CGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCCGGTTGCTGGTAGTACACG < 1:2381149/75‑1 CGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCCGGTTGCTGGTAGTACACG > 2:2381149/1‑75 GCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGAAAAGAGCTTC > 1:1098222/1‑150 CATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGAAAAGAGCTTCA < 1:2222068/150‑1 CCTCAAGGCGCAAACCACCCTGCCCGTCGACGCCAAGAACCACGCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCG‑TAGCGGCGATGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530984‑530833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTTTGCGCCTTGAGGTGGACGGGATGGAAAAGAGCTTCA > NC_002947/530860‑531008 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |