| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 590706 | 87 (0.930) | 6 (0.070) | 7/238 | NT | 6.2% | coding (827/885 nt) | PP_0500 | dTDP‑4‑rhamnose reductase‑like protein |
| ? | NC_002947 | = 590722 | 98 (1.100) | coding (843/885 nt) | PP_0500 | dTDP‑4‑rhamnose reductase‑like protein | |||||
GGCCAGGCGATCCTCGCCGAGGCCGGCCAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/590552‑590706‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagccAGCGCGCCAGGCACGC‑GGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTACCGCGTGCTGTGGCTCTTCGCTGGCATCCGGGCGCGCGGCATGGGCCTGCGGCGTGGGGGCCTGAACGGCCAGCTGGCGGTATTGGCCG < NC_002947/590722‑590575 GGCCAGGCGATCCTCGCCGAGGCCGGCCAATACCGCCAGCTGGCCCACCACCGCCGCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGAGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATC > 1:1023596/1‑150 GCCAGGCGATCCTCGCCGAGGCCGGCCAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCA > 1:1006113/1‑150 CCAGGCGATCCTCGCCGAGGCCGGCCAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAA > 1:1046228/1‑150 CAGGCGATCCTCGCCGAGGCCGGCCAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAG < 2:1382826/150‑1 TCGCCGAGGCCGGCCAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCCAGCGCGCC > 2:1564370/1‑150 AATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCCAGCGCGCCAGGCACGC‑GGCTTGA < 1:1564370/150‑1 CCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCCAGCGCGCCAGGCACGC‑GGCTTGA < 1:483784/110‑1 CCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCCAGCGCGCCAGGCACGC‑GGCTTGA > 2:483784/1‑110 ATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCCAGCGCGCCAGGCACGC‑GGC > 1:2278368/1‑104 ATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCCAGCGCGCCAGGCACGC‑GGC < 2:2278368/104‑1 ATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTCCCGCGTGCTGTGGCTCTTCGCTG < 2:1190786/90‑1 ATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTACCGCGTGCTGTGGCTCTTCGCTG > 1:1190786/1‑90 AAGCCAGCGCGCCAGGCACGC‑GGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTACCGCGTGCTGTGGCTCTTCGCTGGCATCCGGGCGCGCGGCATGGGCCTGCGGCGTGGGGGCCTGAACGGCCAGCTGGCGGTATTGG < 2:1006972/150‑1 AAGCCAGCGCGCCAGGCACGC‑GGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTACCGCGTGCTGTGGCTCTTCGCTGGCATCCGGGCGCGCGGCATGGGCCTGCGGCGTGGGGGCCTGAACGGCCAGCTGGCGGTATTGG < 2:1377872/150‑1 AAGCCAGCGCGCCAGGCACGC‑GGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGACCAGTACCGCGTGCTGTGGCTCTTCGCTGGCATCCGGGCGCGCGGCATGGGCCTGCGGCGTGGGGGCCTGAACGGCCAGCTGGCGGTATTGG > 2:851106/1‑150 GCCAGCGCGCCAGGCACGC‑GGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTACCGCGTGCTGTGGCTCTTCGCTGGCATCCGGGCGCGCGGCATGGGCCTGCGGCGTGGGGGCCTGAACGGCCAGCTGGCGGTATTGGCC < 1:421407/150‑1 GCCAGCGCGCCAGGCACGC‑GGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTACCGCGTGCTGTGGCTCTTCGCTGGCATCCGGGCGCGCGGCATGGGCCTGCGGCGTGGGGGCCTGAACGGCCAGCTGGCGGTATTGGCC > 2:179758/1‑150 CCAGCGCGCCAGGCACGC‑GGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTACCGCGTGCTGTGGCTCTTCGCTGGCATCCGGGCGCGCGGCATGGGCCTGCGGCGTGGGGGCCTGAACGGCCAGCTGGCGGTATTGGCCG > 1:1646822/1‑150 CCAGCGCGCCAGGCACGC‑GACTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTACCGCGTGCTGTGGCTCTTCGCTGGCATCCGGGCGCGCGGCATGGGCCTGCGGCGTGGGGGCCTGAACGGCCAGCTGGCGGTATTGGCCG < 1:2093468/150‑1 GGCCAGGCGATCCTCGCCGAGGCCGGCCAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/590552‑590706‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagccAGCGCGCCAGGCACGC‑GGCTTGATACCGAAGGTATGAAGGATTTTCTTGCAGGCCAGTACCGCGTGCTGTGGCTCTTCGCTGGCATCCGGGCGCGCGGCATGGGCCTGCGGCGTGGGGGCCTGAACGGCCAGCTGGCGGTATTGGCCG < NC_002947/590722‑590575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |