New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1119638 =	100 (1.070)	11 (0.120)	9/242	NT	10.5%	coding (626/1494 nt)	pepA	cytosol aminopeptidase
	?	NC_002947	1119667 =	91 (1.010)					coding (597/1494 nt)	pepA	cytosol aminopeptidase

CTGCTGGCCGACAAAGCCGGCCAGGCCGAAGTCGAGCGTGCGGTCAAGCATGCCAGCGCCATCGCCAGCGGCATGGCCTTCACCCGCGACCTCGGCAACCTGCCGCCCAACCTTTGCCACCCAAGCTACCTGGCC‑GAACAGGCCAAGGAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1119789‑1119638 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGCTTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCT  >  NC_002947/1119667‑1119815                                                                                                                                                                                                                                                                                                                CTGCTGGCCGACAAAGCCGGCCAGGCCGAAGTCGAGCGTGCGGTCAAGCATGCCAGCGCCATCTCCAGCGGCATGGCCTTCACCCGCGACCTCGGCAACCTGCCGCCCAACCTTTGCCACCCAAGCTACCTGGCC‑GAACAGGCCAAGGAG                                                                                                                                                         >  1:2425471/1‑150   GCTGGCCGACAAAGCCGGCCAGGCCGAAGTCGAGCGTGCGGTCAAGCATGCCAGCGCCATCGCCAGCGGCATGGCCTTCACCCGCGACCTCGGCAACCTGCCGCCCAACCTTTGCCACCCAAGCTACCTGGCC‑GAACAGGCCAAGGAGCT                                                                                                                                                       <  2:1786317/150‑1   GCTGGCCGACAAAGCCGGCCAGGCCGAAGTCGAGCGTGCGGTCAAGCATGCCAGCGCCATCGCCAGCAGAATGCTCAACACCCGCGACCACATCAACCGGCCGCCCAACCTTTGCCACCCAAGCTACCTGGCC‑GAACAGGCCAAGGAGCT                                                                                                                                                       <  1:1485592/150‑1              AAGCCGGCCAGGCCGAAGTCGAGCGTGCGGTCAAGCATGCCAGCGCCATCGCCAGCGGCATGGCCTTCACCCGCGACCTCGGCAACCTGCCGCCCAACCTTTGCCACCCCAGCTCCTTGGCCTGTTC‑GGCCAGGTAGCTTGGGTGGCAAA                                                                                                                                            <  1:2063251/150‑1                                                                                                                     CCACCCAAGCTACCTGGCC‑GAACAGGCCAAGGAGCTTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAG                                                                                                         >  1:1398257/1‑82                                                                                                                     CCACCCAAGCTACCTGGCC‑GAACAGGCCAAGGAGCTTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAG                                                                                                         <  2:1398257/82‑1                                                                                                                      CACCCAAGCTACCTGGCC‑GAACAGGCCAAGGAGCTGGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGCTTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCG                                    <  2:2063251/150‑1                                                                                                                          CAAGCTACCTGGCC‑GAACAGGCCAAGGAGCTTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGCTTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCGGCCA                                >  2:2067270/1‑150                                                                                                                          CAAGCTACCTGGCC‑GAACAGGCCAAGGAGCTTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGAT                                                                                        <  1:484026/94‑1                                                                                                                          CAAGCTACCTGGCC‑GAACAGGCCAAGGAGCTTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGAT                                                                                        >  2:484026/1‑94                                                                                                                             GCTACCTGGCC‑GAACAGGCCAAGGAGCTTGGGTGGCAAAGGTTGGGCGGAAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGCTTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCGGCCAGCA                             >  2:2169577/1‑150                                                                                                                              CTACCTGGCC‑GAACAGGCCAAGGAGCTTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGCTTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCGGCCAGCAG                            >  1:1015439/1‑150                                                                                                                              CTACCTGGCC‑GAACAGGCCAAGGAGCTTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGATTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCGGCCAGCAG                            >  1:1316525/1‑150                                                                                                                                            gAGGCCAGTGAGCTGGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGATTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCGGCCAGCAGGGTGACCTTTTTC               <  2:1316525/149‑1                                                                                                                                                        CTTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGCTTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGC   <  2:1806600/150‑1                                                                                                                                                         TTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGCTTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCT  >  2:2259423/1‑150                                                                                                                                                                                                                                                                                                                CTGCTGGCCGACAAAGCCGGCCAGGCCGAAGTCGAGCGTGCGGTCAAGCATGCCAGCGCCATCGCCAGCGGCATGGCCTTCACCCGCGACCTCGGCAACCTGCCGCCCAACCTTTGCCACCCAAGCTACCTGGCC‑GAACAGGCCAAGGAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1119789‑1119638 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctTGGGTGGCAAAGGTTGGGCGGCAGGTTGCCGAGGTCGCGGGTGAAGGCCATGCCGCTGGCGATGGCGCTGGCATGCTTGACCGCACGCTCGACTTCGGCCTGGCCGGCTTTGTCGGCCAGCAGGGTGACCTTTTTCAGCGCGCGCGGCT  >  NC_002947/1119667‑1119815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.