| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3622266 | 86 (0.920) | 11 (0.130) | 11/226 | NT | 12.1% | intergenic (‑186/+40) | PP_3192/PP_3193 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 3622288 | 82 (0.970) | intergenic (‑208/+18) | PP_3192/PP_3193 | hypothetical protein/hypothetical protein | |||||
CTATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3622110‑3622266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttggcctgTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCCGT < NC_002947/3622288‑3622142 CTATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCT > 2:2131237/1‑150 TATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTT < 1:873133/150‑1 GGTGGCCTTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGt < 2:752173/150‑2 GGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTCCTGCGTCAGCAGGATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGC < 2:1329345/150‑1 GGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGC < 1:2283685/150‑1 GGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGC < 1:2043668/150‑1 GTGGCCCTGGAGAATACTGGGCACAAGATGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCC > 2:1253671/1‑150 TGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCT > 2:869663/1‑150 GGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGG < 2:608813/149‑1 GGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGG > 1:608813/1‑149 CGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGG < 2:815473/150‑1 GGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCC > 1:1427030/1‑99 GGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCC < 2:1427030/99‑1 GGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAG < 1:1344450/137‑1 GGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAG > 2:1344450/1‑137 ATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCA > 1:1090615/1‑94 ATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCA < 2:1090615/94‑1 TGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAG > 2:1039449/1‑90 TGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAG < 1:1039449/90‑1 CAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGG < 1:1595595/45‑1 CAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGG > 2:1595595/1‑45 GCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCC < 1:1742654/58‑1 GCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCC > 2:1742654/1‑58 CTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGA < 1:1086746/107‑1 CTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGA > 2:1086746/1‑107 CTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGA < 1:1086923/107‑1 CTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGA > 2:1086923/1‑107 TTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGA < 1:91012/150‑1 TTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGA < 2:397289/150‑1 GGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGA > 2:591087/1‑109 GGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGA < 1:591087/109‑1 GCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCC > 2:529026/1‑150 GCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAA < 2:1643194/145‑1 GCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAA > 1:1643194/1‑145 CCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCCG > 1:2278439/1‑150 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCCGT > 2:729440/1‑150 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCCGT > 1:1953888/1‑150 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCCGT > 2:80168/1‑150 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGAC > 1:990973/1‑87 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGAC < 2:990973/87‑1 GTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCA > 2:445705/1‑88 GTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCA < 1:445705/88‑1 CTATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3622110‑3622266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttggcctgTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCCGT < NC_002947/3622288‑3622142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |