New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3951141 | 23 (0.250) | 4 (0.060) | 4/194 | NT | 14.6% | intergenic (‑61/+134) | PP_3486/PP_3487 | cytochrome c/hypothetical protein |
? | NC_002947 | = 3951201 | 29 (0.400) | intergenic (‑121/+74) | PP_3486/PP_3487 | cytochrome c/hypothetical protein |
CCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3950970‑3951141 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgcgtcgcgaaaggAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTTGCGATATGGCTTACCTG‑‑CGTGCTTGGCATGGCAACTTCGACCTCAGCCCTGGC < NC_002947/3951201‑3951055 CCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGG > 2:2123292/1‑150 TTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCG < 1:2123292/150‑1 GAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTC < 2:3521/150‑1 CGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCG < 1:1462552/150‑1 TCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAA < 1:41944/150‑1 GCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAG < 1:2013734/150‑1 CTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGG > 1:986856/1‑150 CTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAG > 1:177693/1‑115 CTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAG < 2:177693/115‑1 CTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGT > 2:1723204/1‑91 CTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGT < 1:1723204/91‑1 TCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGC > 1:1314293/1‑150 GCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGG > 1:1396644/1‑64 GCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGG < 2:1396644/64‑1 TGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGAC < 2:1314293/150‑1 AAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCC > 1:2199903/1‑119 AAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCC < 2:2199903/119‑1 GGCCTTGCGTCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTTCGCAGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTTGCGATATGGCTTACCTG‑‑CGAGCTTGGCATGGCAACTT > 1:707409/1‑150 CCTTGCGTCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTTGCGATATGGCTTATCTG‑‑CGTGCTTGGCATGGCAACTTCG > 1:2310992/1‑150 CTTGCGTCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGCGCTGCCACTGCCGGGGCTGCTGCGCCGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTTGCGCTATGGCTTACCTG‑‑CGTGCTTGGCATGGCGACTTCGc > 1:1064139/1‑149 GTCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCGGCGCAGCGCTTTCGCGACGACAGGACGCTCCCAAAAGGCTTACTATATGTCTTACCTT‑‑CGTACTTGGCATTGCAACTTCGACCTCA > 2:1330662/1‑150 TCGCGAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTTGCGATATGGCTTACCTG‑‑CGTGCTTGGCATGGCAACTTCGACCTCAG > 1:492616/1‑150 GAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTTGCGATATGGCTTACCTG‑‑CGTGCTTGGCATGGCAACTTCGACCTCAGCCCT > 2:986856/1‑150 GAAAGGAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTTGCGATATGGCTTACCTG‑‑CGTGCTTGGCATGGCAACTTCGACCTCAGCCCT > 2:104674/1‑150 AAGTAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTTGCGATATGGCTT‑‑CTGAACTTGCTTGGCATGGCAACTTCGGCCTGAGCCCTGG > 1:123288/1‑150 gGGAGCGCGCGGCGCTCGCCTCTTTCTGCGCTTGAGCGGCCCCGGCCGGGGCTGCTGCGCAGCCCTTTCGGGACGCAAGGCCGCTCCCACAGGGCTTGCGATATGGCTTACCTG‑‑CGTGCTGGGCATGGCAACTTCGACCTCAGCCCTGGC < 2:1064139/149‑1 CCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3950970‑3951141 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgcgtcgcgaaaggAGCGCGCAGCGCTCCCCTCTTTCTGCGCTTGAGCTGCCACTGCCGGGGCTGCTGCGCAGCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCTTGCGATATGGCTTACCTG‑‑CGTGCTTGGCATGGCAACTTCGACCTCAGCCCTGGC < NC_002947/3951201‑3951055 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |