| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4819028 | 98 (1.050) | 5 (0.060) | 5/238 | NT | 5.2% | coding (12207/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4819050 | 90 (1.010) | coding (12185/12954 nt) | pvdL | non‑ribosomal peptide synthetase | |||||
CAGCTCGATGCGATAGCCGCGAATCTTCACCTGATGGTCGATGCGCCCGACGTACTCCAGCACACCGTCCAGGCGCTGCCGTGCGAGGTCACCGGTACGGTACAGGCGCTCTCCCGGTGCCCCGTAAGGGTGAGGAATGAACGCCAGTGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4818875‑4819028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtgGCTACGTCGGTGACCCGGTGCGCACGGCACTGGCGTTCATTCCTCACCCTTACGGGGCACCGGGAGAGCGCCTGTACCGTACCGGTGACCTCGCACGGCAGCGCCTGGACGGTGTGCTGGAGTACGTCGGGCGCATCGACCATCAG < NC_002947/4819050‑4818905 CAGCTCGATGCGATAGCCGCGAATCTTCACCTGATGGTCGATGCGCCCGACGTACTCCAGCACACCGTCCAGGCGCTGCCGTGCGAGGTCACCGGTACGGTACAGGCGCTCTCCCGGTGCCCCGTAAGGGTGAGGAATGAACGCCAGTGC < 1:1091913/150‑1CAGCTCGATGCGATAGCCGCGAATCTTCACCTGATGGTCGATGCGCCCGACGTACTCCAGCACACCGTCCAGGCGCTGCCGTGCGAGGTCACCGGTACGGTACAGGCGCTCTCACTGTGCCCCGTAAGGGTGAGGAATGAACGCCAGTGC > 1:1195156/1‑150 GCTCGATGCGATAGCCGCGAATCTTCACCTGATGGTCGATGCGCCCGACGTACTCCAGCACACCGTCCAGGCGCTGCCGTGCGAGGTCACCGGTACGGTACAGGCGCTCTCCCGGTGCCCCGTAAGGGTGAGGAATGAACGCCAGTGCCG < 1:2166915/150‑1 TGGTCGATGCGCCCGACGTACTCCAGCACACCGTCCAGGCGCTGCCGTGCGAGGTCACCGGTACGGTACAGGCGCTCTCCCGGTGCCCCGTAAGGGTGAGGAATGAACGCCAGTGCCGTGGCTACGTCGGTGACCCGGTGCGCACGGCAC < 1:2288692/150‑1 TCGATGCGCCCGACGTACTCCAGCACACCGTCCAGGCGCTGCCGTGCGAGGTCACCGGTACGGTACAGGCGCTCTCCCGGTGCCCCGTAAGGGTGAGGAATGAACGCCAGTGCCGTGGCTACGTCGGTGACCCGGTGCGCACGGC > 1:1101524/1‑145 TCGATGCGCCCGACGTACTCCAGCACACCGTCCAGGCGCTGCCGTGCGAGGTCACCGGTACGGTACAGGCGCTCTCCCGGTGCCCCGTAAGGGTGAGGAATGAACGCCAGTGCCGTGGCTACGTCGGTGACCCGGTGCGCACGGC < 2:1101524/145‑1 CTCCCGGTGCCCCGTAAGGGTGAGGAATGAACGCCAGTGCCGTGGCTACGTCGGTGACCCGGTGCGCACGGCACTGGCGTT > 2:122663/1‑81 CTCCCGATGCCCCGTAAGGGTGAGGAATGAACGCCAGTGCCGTGGCTACGTCGGTGACCCGGTGCGCACGGCACTGGCGTT < 1:122663/81‑1 CCGTGGCTACGTCGGTGACCCGGTGCGCACGGCACTGGCGTTCATTCCTCACCCTTACGGGGCACCGGGAGAGCGCCTGTACCGTACCGGTGACCTCGCACGGCAGCGCCTGGACGGTGTGCTGGAGTACGTCGGGCGCATCGACCATCA > 1:753044/1‑150 CGTGGCTACGTCGGTGACCCGGTGCGCACGGCACTGGCGTTCATTCCTCACCCTTACGGGGCACCGGGAGAGCGCCTGTACCGTACCGGTGACCTCGCACGGCAGCGCCTGGACGGTGTGCTGGAGTACGTCGGGCGCATCGACCATCAG < 1:1884993/150‑1 CAGCTCGATGCGATAGCCGCGAATCTTCACCTGATGGTCGATGCGCCCGACGTACTCCAGCACACCGTCCAGGCGCTGCCGTGCGAGGTCACCGGTACGGTACAGGCGCTCTCCCGGTGCCCCGTAAGGGTGAGGAATGAACGCCAGTGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4818875‑4819028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtgGCTACGTCGGTGACCCGGTGCGCACGGCACTGGCGTTCATTCCTCACCCTTACGGGGCACCGGGAGAGCGCCTGTACCGTACCGGTGACCTCGCACGGCAGCGCCTGGACGGTGTGCTGGAGTACGTCGGGCGCATCGACCATCAG < NC_002947/4819050‑4818905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |