New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6178276 =193 (2.070)10 (0.110) 10/242 NT 5.5% coding (858/1545 nt) atpA ATP synthase subunit alpha
?NC_002947 6178305 = 154 (1.700)coding (829/1545 nt) atpA ATP synthase subunit alpha

Only 100 of 219 total aligned reads displayed.

CCAGCCTGGGTTTCGATGATCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAA  >  NC_002947/6178127‑6178425
                                                                                                                                                     |                                                                                                                                                     
cagtgcttcggaatccgccgcactgcaattcctggcgccatacgccggttgcaccatgggcgagttcttccgcgaccgcggtgaagacgcactgatcgtttacgatgacctgtccaagcaggccgttgcctaccgtcagatctccctgct                                                                                                                                                       <  2:1984565‑M1/1‑1 (MQ=255)
   tgcttcggaatccgccgcactgcaattcctggcgccatacgccggttgcaccatgggcgagttcttccgcgaccgcggtgaagacgcactgatcgtttacgatgacctgtccaagcaggccgttgcctaccgtcagatctccctgctgct                                                                                                                                                    >  1:937056‑M1/147‑150 (MQ=255)
   tgcttcggaatccgccgcactgcaattcctggcgccatacgccggttgcaccatgggcgagttcttccgcgaccgcggtgaagacgcactgatcgtttacgatgacctgtccaagcaggccgttgcctaccgtcagatctccctgctgct                                                                                                                                                    >  1:930682‑M1/147‑150 (MQ=255)
    ccTGGGTTTCGATGATCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGGACACGTCGCCCTGGTATGCtt                                                                                                                                                   >  2:416794/1‑150 (MQ=255)
    ccTGGGTTTCGATGATCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCtt                                                                                                                                                   >  1:1337169/1‑150 (MQ=255)
    ccTGGGTTTCGATGATCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCt                                                                                                                                                    <  2:2322899/149‑1 (MQ=255)
     cTGGGTTTCGATGATCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTc                                                                                                                                                  <  1:1805429/150‑1 (MQ=255)
      ttcggaatccgccgcactgcaattcctggcgccatacgccggttgcaccatgggcgagttcttccgcgaccgaggtgaagacgcactgatcgtttacgatgacctgacccggagggccgtcgcctaccgtcagagctccgtgctgccgcc                                                                                                                                                 <  2:1202950‑M1/7‑5 (MQ=255)
       gggTTTCGATGATCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTcgc                                                                                                                                                <  2:2148507/150‑1 (MQ=255)
        ggTTTCGATGATCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGCTGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGGCGCCTGGGTATGCTTcgcg                                                                                                                                               >  2:687175/1‑150 (MQ=255)
              gatgatCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTc                                                                                                                                                  <  2:365054/141‑1 (MQ=255)
              gatgatCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTc                                                                                                                                                  >  1:365054/1‑141 (MQ=255)
               atgatCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCtggt                                                                                                                                        <  1:63354/150‑1 (MQ=255)
                tgatCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCtggtg                                                                                                                                       >  1:109310/1‑150 (MQ=255)
                 gatCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCtggtgg                                                                                                                                      >  2:1613973/1‑150 (MQ=255)
                     ggCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACgg                                                                                                                                  <  1:477426/150‑1 (MQ=255)
                       cAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGgcg                                                                                                                                <  1:1587733/150‑1 (MQ=255)
                       cAGAGCGGGCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGgcg                                                                                                                                <  1:848065/150‑1 (MQ=255)
                         caattcctggcgccatacgccggttgcaccatgggcgagttcttccgcgaccgcggtgaagacgcactgatcgtttacgatgacctgtccaagcaggccgttgcctaccgtcagatctccctgcTGCTTCGCGTCCTGGTGGACGGCgca                                                                                                                              >  1:760054‑M1/125‑150 (MQ=255)
                           gCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCgcagc                                                                                                                            >  1:2108932/1‑150 (MQ=255)
                               tCAGGGAACCGGTTTTGCCAGTGACAGCCCCGTAGGTGAACTTCTCGACCTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGATCACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCgcagcagca                                                                                                                        <  2:1232906/150‑1 (MQ=255)
                                cAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGcagcagcag                                                                                                                       <  2:878046/150‑1 (MQ=255)
                                 aGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGGCATAGAACCCGTCGCCTATGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAgg                                                                                                                      <  1:416794/150‑1 (MQ=255)
                                 aGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAgg                                                                                                                      <  2:1313895/150‑1 (MQ=255)
                                 aGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAgg                                                                                                                      >  1:195748/1‑150 (MQ=255)
                                 aGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAgg                                                                                                                      <  2:2077789/150‑1 (MQ=255)
                                     aaCCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCtgg                                                                                                                                         >  1:424755/1‑127 (MQ=255)
                                     aaCCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGgaga                                                                                                                  >  2:2043254/1‑150 (MQ=255)
                                      aCCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGAt                                                                                                                 <  1:809035/150‑1 (MQ=255)
                                           ttttGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGGCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGAc                                                                                                            <  2:1852633/150‑1 (MQ=255)
                                            tttGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACg                                                                                                           <  2:1343826/150‑1 (MQ=255)
                                                ccAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGGCCGGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAg                                                                                                       >  1:1202950/1‑150 (MQ=255)
                                                   gTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGcagcagcag                                                                                                                       >  1:1710238/1‑131 (MQ=255)
                                                    tGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCaa                                                                                                   <  2:1337169/150‑1 (MQ=255)
                                                    accatgggcgagttcttccgcgaccgcggtgaagacgcactgatcgtttacgatgacctgtccaagcaggccgttgcctaccgtcagatctccctgcTGCTTCGCGTCCTGGTGGACGGCgcagca                                                                                                                           >  2:1749634‑M1/98‑126 (MQ=255)
                                                    accatgggcgagttcttccgcgaccgcggtgaagacgcactgatcgtttacgatgacctgtccaagcaggccgttgcctaccgtcagatctccctgcTGCTTCGCGTCCTGGTGGACGGCgcagca                                                                                                                           <  1:1749634‑M1/29‑1 (MQ=255)
                                                      aCAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTc                                                                                                                                                  >  1:1870428/1‑101 (MQ=255)
                                                      aCAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCtg                                                                                                                                          >  2:1296218/1‑109 (MQ=255)
                                                      aCAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCtg                                                                                                                                          <  1:1296218/109‑1 (MQ=255)
                                                        aGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGCCGGTAGGCAACGGc                                                                                               >  1:872724/1‑150 (MQ=255)
                                                        aGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGc                                                                                               <  2:463508/150‑1 (MQ=255)
                                                          cACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGCTAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAGCGGccg                                                                                             >  1:907793/1‑149 (MQ=255)
                                                            ccGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGc                                                                                           <  2:907701/150‑1 (MQ=255)
                                                             cGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCtgg                                                                                                                                         <  2:1825651/103‑1 (MQ=255)
                                                             cGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAggg                                                                                                                     <  2:54315/123‑1 (MQ=255)
                                                             cGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCt                                                                                          >  1:1503945/1‑150 (MQ=255)
                                                             cGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCt                                                                                          >  1:1920267/1‑150 (MQ=255)
                                                              gTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGga                                                                                                                    >  1:688340/1‑123 (MQ=255)
                                                              gTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGGCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCtt                                                                                         <  2:1697856/150‑1 (MQ=255)
                                                               ttGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACg                                                                                                           >  1:1140774/1‑131 (MQ=255)
                                                               ttGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACg                                                                                                           <  2:1140774/131‑1 (MQ=255)
                                                                  gTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTg                                                                                        >  2:143237/1‑147 (MQ=255)
                                                                  gTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGAc                                                                                     >  2:1928659/1‑150 (MQ=255)
                                                                          ctcGACGTACTCTTCCGAAACGCGCGGTGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATc                                                                             <  2:499970/150‑1 (MQ=255)
                                                                             gACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTa                                                                          >  2:638995/1‑150 (MQ=255)
                                                                               cGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGNaaa                                                                        <  2:1503945/150‑1 (MQ=255)
                                                                                   ctctTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGAt                                                                    <  2:28502/150‑1 (MQ=255)
                                                                                    tctTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATc                                                                   >  2:693584/1‑150 (MQ=255)
                                                                                     ctTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCa                                                                  <  2:635422/150‑1 (MQ=255)
                                                                                      ttCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGTAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAg                                                                 >  1:373483/1‑150 (MQ=255)
                                                                                      ttCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAg                                                                 >  1:1108694/1‑150 (MQ=255)
                                                                                       tCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGt                                                                <  2:109310/150‑1 (MQ=255)
                                                                                         cGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGc                                                              <  1:2381225/150‑1 (MQ=255)
                                                                                         cGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGc                                                              >  2:2109170/1‑150 (MQ=255)
                                                                                            aaCGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTACTGCACCGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACAATCAGTGCGTc                                                           >  2:1262774/1‑150 (MQ=255)
                                                                                                 gcgATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCAc                                                      <  1:2327586/150‑1 (MQ=255)
                                                                                                  cgATGTACGCTCCAGCAGACGTGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGAAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCAcc                                                     <  2:933884/150‑1 (MQ=255)
                                                                                                  cgATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAg                                                                                   >  1:2316441/1‑120 (MQ=255)
                                                                                                    aTGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGTTAAGTGCGGCTTCACcgc                                                   <  2:1920267/150‑1 (MQ=255)
                                                                                                    aTGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACcgc                                                   <  1:2149153/150‑1 (MQ=255)
                                                                                                         cGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTcg                                              >  2:654458/1‑150 (MQ=255)
                                                                                                              cagcagACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGgaa                                         <  2:47842/150‑1 (MQ=255)
                                                                                                              cagcagACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGgaa                                         <  2:139673/150‑1 (MQ=255)
                                                                                                                gcagACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGgaaga                                       >  1:138240/1‑150 (MQ=255)
                                                                                                                 cagACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGgaagaa                                      >  1:636380/1‑150 (MQ=255)
                                                                                                                      gggAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGc                                 <  2:1955930/150‑1 (MQ=255)
                                                                                                                           tGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGTTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATg                            <  1:2046414/150‑1 (MQ=255)
                                                                                                                             gagaTAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTTGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGt                          >  2:1082115/1‑150 (MQ=255)
                                                                                                                             gagaTAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGt                          <  2:2380647/150‑1 (MQ=255)
                                                                                                                              agaTAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTc                                   >  2:2201897/1‑140 (MQ=255)
                                                                                                                              agaTAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTc                                   <  1:2201897/140‑1 (MQ=255)
                                                                                                                              agaTAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTg                         >  2:2304325/1‑150 (MQ=255)
                                                                                                                              agaTAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTg                         >  1:642963/1‑150 (MQ=255)
                                                                                                                                  aGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAAc                     >  1:2259756/1‑150 (MQ=255)
                                                                                                                                   gAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTa                                                                                                        >  2:823728/1‑66 (MQ=255)
                                                                                                                                    aaCACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCAt                                                                              >  2:242711/1‑91 (MQ=255)
                                                                                                                                    aaCACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCAt                                                                              <  1:242711/91‑1 (MQ=255)
                                                                                                                                    aaCACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATgg                           >  1:1941434/1‑142 (MQ=255)
                                                                                                                                      cacGTCGCCTGGGTATGCTTCGCGTCCTGGTGGTTGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCCCCCATGGTGCAACCGGc                 >  1:1046230/1‑150 (MQ=255)
                                                                                                                                      cacGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGc                 >  1:1893448/1‑150 (MQ=255)
                                                                                                                                       acGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGAt                                                                    <  2:1114994/98‑1 (MQ=255)
                                                                                                                                       acGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCAt                             <  2:966924/137‑1 (MQ=255)
                                                                                                                                         gTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTa              >  1:192708/1‑150 (MQ=255)
                                                                                                                                         gTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTa              <  1:591066/150‑1 (MQ=255)
                                                                                                                                         gTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTa              >  2:2282622/1‑150 (MQ=255)
                                                                                                                                            gCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATgg           <  1:1402511/150‑1 (MQ=255)
                                                                                                                                              cTGGGTATGCTTCGCGTCCTGGTGGACGGCgcagca                                                                                                                           <  1:2377619/36‑1 (MQ=255)
                                                                                                                                              cTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTc                                                                                <  1:1625197/79‑1 (MQ=255)
                                                                                                                                                 ggTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGgccgga      <  1:82540/150‑5 (MQ=255)
                                                                                                                                                 ggTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCa      <  1:1467296/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCAGCCTGGGTTTCGATGATCGGCAGAGCGGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCTGGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAA  >  NC_002947/6178127‑6178425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.