New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6178276 =193 (2.070)10 (0.110) 10/242 NT 5.5% coding (858/1545 nt) atpA ATP synthase subunit alpha
?NC_002947 6178305 = 154 (1.700)coding (829/1545 nt) atpA ATP synthase subunit alpha

Only 100 of 198 total aligned reads displayed.

GGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTGCGGCGGATTCCGAAGCACTGG  >  NC_002947/6178156‑6178454
                                                                                                                                                       |                                                                                                                                                     
   cAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGcagcagcag                                                                                                                                                    <  2:878046/150‑1 (MQ=255)
    ctggcgccatacgccggttgcaccatgggcgagttcttccgcgaccgcggtgaagacgcactgatcgtttacgatgacctgtccaagcaggccgttgcctaccgtcagatctccctgcTGCTTCGCGTCCTGGTGGACGGCgcagcagca                                                                                                                                                     >  1:27077‑M1/119‑150 (MQ=255)
    aGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAgg                                                                                                                                                   <  2:1313895/150‑1 (MQ=255)
        aaCCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGgaga                                                                                                                                               >  2:2043254/1‑150 (MQ=255)
         aCCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGAt                                                                                                                                              <  1:809035/150‑1 (MQ=255)
           cGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCt                                                                                                                                            >  2:1131964/1‑150 (MQ=255)
             tacgccggttgcaccatgggcgagttcttccgcgaccgcggtgaagacgcactgatcgtttacgatgacctgtccaagcaggccgttgcctaccgtcagatctccctgcTGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAgg                                                                                                                                                   >  1:2001485‑M1/110‑143 (MQ=255)
             tacgccggttgcaccatgggcgagttcttccgcgaccgcggtgaagacgcactgatcgtttacgatgacctgtccaagcaggccgttgcctaccgtcagatctccctgcTGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAgg                                                                                                                                                   <  2:2001485‑M1/34‑1 (MQ=255)
             gTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGa                                                                                                                                          <  1:1503162/150‑1 (MQ=255)
              ttttGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGAc                                                                                                                                         <  2:990075/150‑1 (MQ=255)
               tttGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACg                                                                                                                                        <  2:1343826/150‑1 (MQ=255)
                   ccAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGGCCGGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAg                                                                                                                                    >  1:1202950/1‑150 (MQ=255)
                    cAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAgg                                                                                                                                   >  1:139673/1‑150 (MQ=255)
                    cAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAgg                                                                                                                                   >  1:2291280/1‑150 (MQ=255)
                     aGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCNTCGCGTCCTNGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGc                                                                                                                                  <  1:595784/150‑1 (MQ=255)
                      gTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCa                                                                                                                                 >  1:1302529/1‑150 (MQ=255)
                       tGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCaa                                                                                                                                <  2:1337169/150‑1 (MQ=255)
                           aGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGCCGGTAGGCAACGGc                                                                                                                            >  1:872724/1‑150 (MQ=255)
                             cACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGCTAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAGCGGccg                                                                                                                          >  1:907793/1‑149 (MQ=255)
                                cGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAggg                                                                                                                                                  >  1:54315/1‑123 (MQ=255)
                                cGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAggg                                                                                                                                                  <  2:54315/123‑1 (MQ=255)
                                cGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCt                                                                                                                       >  1:1092049/1‑150 (MQ=255)
                                cGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCt                                                                                                                       >  1:28502/1‑150 (MQ=255)
                                 gTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGga                                                                                                                                                 >  1:688340/1‑123 (MQ=255)
                                 gTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCtt                                                                                                                      <  1:1724274/150‑1 (MQ=255)
                                 gTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCtt                                                                                                                      <  2:195748/150‑1 (MQ=255)
                                 gTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGGCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCtt                                                                                                                      <  2:1697856/150‑1 (MQ=255)
                                  ttGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTg                                                                                                                     <  2:1092049/150‑1 (MQ=255)
                                    ggTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGa                                                                                                                   <  1:1682622/150‑1 (MQ=255)
                                     gTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTg                                                                                                                     <  1:143237/147‑1 (MQ=255)
                                     gTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTg                                                                                                                     >  2:143237/1‑147 (MQ=255)
                                     gTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGAc                                                                                                                  >  1:1777827/1‑150 (MQ=255)
                                        aaCTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCATAACAATATGATT‑‑CTTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAgg                                                                                                               >  1:2253111/1‑150 (MQ=255)
                                         aCTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCGTGGACAggg                                                                                                              >  1:832328/1‑149 (MQ=255)
                                          cTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTc                                                                                                             >  2:2083248/1‑150 (MQ=255)
                                           ttCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCa                                                                                                            >  1:1900242/1‑150 (MQ=255)
                                              tcGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCg                                                                                                         >  2:591066/1‑150 (MQ=255)
                                              tcGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTGCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCg                                                                                                         <  2:1900242/150‑1 (MQ=255)
                                                  cGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGNaaa                                                                                                     <  2:1503945/150‑1 (MQ=255)
                                                       tctTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATc                                                                                                >  1:2380647/1‑150 (MQ=255)
                                                       tctTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATc                                                                                                >  2:693584/1‑150 (MQ=255)
                                                        ctTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCa                                                                                               >  1:1955930/1‑150 (MQ=255)
                                                         ttCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAg                                                                                              >  1:1926872/1‑150 (MQ=255)
                                                         ttCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAg                                                                                              >  1:1108694/1‑150 (MQ=255)
                                                          tCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGt                                                                                             <  1:1928659/150‑1 (MQ=255)
                                                          tCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGt                                                                                             <  2:109310/150‑1 (MQ=255)
                                                                    gcgATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCAc                                                                                   <  1:2327586/150‑1 (MQ=255)
                                                                     cgATGTACGCTCCAGCAGACGTGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGAAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCAcc                                                                                  <  2:933884/150‑1 (MQ=255)
                                                                       aTGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACcgc                                                                                >  2:482878/1‑150 (MQ=255)
                                                                          cACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGt                                                                             >  1:1142383/1‑150 (MQ=255)
                                                                          cACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGt                                                                             >  2:2116372/1‑150 (MQ=255)
                                                                              cTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTcgcg                                                                         <  1:409110/150‑1 (MQ=255)
                                                                                 cagcagACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGgaa                                                                      <  2:139673/150‑1 (MQ=255)
                                                                                              tGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTCGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATg                                                         >  2:943826/1‑150 (MQ=255)
                                                                                              tGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGTTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATg                                                         <  1:2046414/150‑1 (MQ=255)
                                                                                              tGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATg                                                         <  1:2109170/150‑1 (MQ=255)
                                                                                              tGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATg                                                         <  2:636380/150‑1 (MQ=255)
                                                                                                gagaTAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTTGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGt                                                       >  2:1082115/1‑150 (MQ=255)
                                                                                                gagaTAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGt                                                       <  2:2380647/150‑1 (MQ=255)
                                                                                                 agaTAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTc                                                                >  2:2201897/1‑140 (MQ=255)
                                                                                                 agaTAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTg                                                      >  2:2304325/1‑150 (MQ=255)
                                                                                                   aTAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCa                                                    >  1:1341981/1‑150 (MQ=255)
                                                                                                      gAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTa                                                                                                                                     >  2:823728/1‑66 (MQ=255)
                                                                                                      gAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTa                                                                                                                                     <  1:823728/66‑1 (MQ=255)
                                                                                                       aaCACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCAt                                                                                                           >  2:242711/1‑91 (MQ=255)
                                                                                                       aaCACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATgg                                                        <  2:1941434/142‑1 (MQ=255)
                                                                                                         cacGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGTTGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCCCCCATGGTGCAACCGGc                                              >  1:1046230/1‑150 (MQ=255)
                                                                                                         cacGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCATCGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGc                                              <  2:1302529/150‑1 (MQ=255)
                                                                                                         cacGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGc                                              <  1:638995/150‑1 (MQ=255)
                                                                                                          acGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGAt                                                                                                 <  2:1114994/98‑1 (MQ=255)
                                                                                                          acGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCAt                                                          >  1:966924/1‑137 (MQ=255)
                                                                                                          acGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCATGCTTGAACAGTTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCACATGGTGCAACCGGCg                                             >  2:1146506/1‑150 (MQ=255)
                                                                                                            gTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGCCCGGTCGTCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTa                                           >  2:1255258/1‑150 (MQ=255)
                                                                                                            gTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTa                                           >  2:2282622/1‑150 (MQ=255)
                                                                                                               gCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATc                                                                                                          >  2:1230826/1‑84 (MQ=255)
                                                                                                                 cT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGgcg                                      >  2:475930/1‑150 (MQ=255)
                                                                                                                  t‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAg                                                                                                                <  2:655169/75‑1 (MQ=255)
                                                                                                                  t‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAg                                                                                                                >  1:655169/1‑75 (MQ=255)
                                                                                                                       tgctgctgcgccgtccaccaggacgcgaagcaGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAg                                  <  2:27077‑M2/118‑1 (MQ=255)
                                                                                                                       gTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAg                                  >  1:935149/1‑150 (MQ=255)
                                                                                                                         ctgctgcgccgtccaccaggacgcgaagcaGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATc                                                                                                          <  2:1840533‑M2/46‑1 (MQ=255)
                                                                                                                         ctgctgcgccgtccaccaggacgcgaagcaGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATc                                                                                                          >  1:1840533‑M2/31‑76 (MQ=255)
                                                                                                                          tgctgcgccgtccaccaggacgcgaagcaGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGt                                                       >  2:1749634‑M2/30‑126 (MQ=255)
                                                                                                                          TGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACCGCCCTTCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGaa                               >  1:1613973‑M1/1‑150 (MQ=255)
                                                                                                                            CTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTcgc                                                                          <  2:675195‑M1/105‑1 (MQ=255)
                                                                                                                             tgcgccgtccaccaggacgcgaagcaGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTg                            >  1:760054‑M2/27‑150 (MQ=255)
                                                                                                                             TTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTg                            <  1:1987253‑M1/150‑1 (MQ=255)
                                                                                                                             TTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTg                            >  1:2169548‑M1/1‑150 (MQ=255)
                                                                                                                               cgcgTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCa                          <  2:1777827/150‑1 (MQ=255)
                                                                                                                                gcgTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAg                         >  2:1873806/1‑150 (MQ=255)
                                                                                                                                 cgTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGTAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGt                        <  2:373483/150‑1 (MQ=255)
                                                                                                                                  gTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTg                       >  2:813186/1‑150 (MQ=255)
                                                                                                                                    ccTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTgcg                     >  1:1403305/1‑150 (MQ=255)
                                                                                                                                     cTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTgcgg                    <  1:2282622/150‑1 (MQ=255)
                                                                                                                                        gtggACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACa                                                                                                                 >  1:2388048/1‑54 (MQ=255)
                                                                                                                                         tggACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTGCGGCGGa                <  2:192708/150‑1 (MQ=255)
                                                                                                                                                cgcAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTGCGGCGGATTCCgca         <  1:1131964/150‑3 (MQ=255)
                                                                                                                                                cgcAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTGCGGCGGATTCCGaa         <  2:290693/150‑1 (MQ=255)
                                                                                                                                                      aGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTGCTTCGGAATCCGCCGCACTg   <  2:642963‑M2/149‑1 (MQ=255)
                                                                                                                                                       gcagGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTGCGGCGGATTCCGAAGCACTgg  <  1:1873806/150‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
GGTCAGGGAACCGGTTTTGCCAGTGACAGCACCGTTGGTGAACTTCTCGACGTACTCTTCCGAAACGCGCGATGCACGCTCCAGCAGACGGGAGTGGAGATAGAACACGTCGCCT‑‑GGGTATGCTTCGCGTCCTGGTGGACGGCGCAGCAGCAGGGAGATCTGACGGTAGGCAACGGCCTGCTTGGACAGGTCATCGTAAACGATCAGTGCGTCTTCACCGCGGTCGCGGAAGAACTCGCCCATGGTGCAACCGGCGTATGGCGCCAGGAATTGCAGTGCGGCGGATTCCGAAGCACTGG  >  NC_002947/6178156‑6178454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.