New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5816910 =	24 (0.260)	23 (0.290)	14/214	NT	52.0%	intergenic (+40/+89)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5816973 =	22 (0.280)					intergenic (+103/+26)	PP_5092/pilT	NLP/P60 protein/twitching motility protein

TGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCC  >  NC_002947/5816833‑5817113                                                                                                                                             |                                                                                                                                             tgcNGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGaa                                                                                                                                     >  2:1500063/1‑150 (MQ=255)  gcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGaaa                                                                                                                                    <  2:45762/150‑1 (MQ=255)   ccGAAAGAGCAGCAGCTGAGTCTGGCCAAGAGATAGGATGGAACGAGCTATACGCGGTCTGCGCCTTCGGGGTCACGCCCGCTCCCACAGGTAGCGCGGCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAg                                                                                                                                   >  1:45762/1‑150 (MQ=19)    cGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAgg                                                                                                                                  <  1:1657286/150‑1 (MQ=255)           gcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACCGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATCCCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTg                                                                                                                           <  2:1850534/150‑1 (MQ=255)                       tCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACaa                                                                                                               <  1:1516935/150‑1 (MQ=255)                             cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCGCCCCCAGCTAGCGCGTCGCTCTCGCGCGCCGCCCACCTACCTGTGGGAGCGGGCGCGCCCGCGACAGGGCCTTTGCCGGTACTACAAGCCttt                                                                                                         >  1:276183/1‑150 (MQ=38)                                 cGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATc                                                                                                     <  2:841558/150‑1 (MQ=255)                                   ttAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCaa                                                                                                   <  2:222991/150‑1 (MQ=255)                                    tAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAAc                                                                                                  <  2:474901/150‑1 (MQ=255)                                               gcgcTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGccc                                                                                                                                          <  2:1279828/99‑1 (MQ=255)                                               gcgcTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGccc                                                                                                                                          >  1:1279828/1‑99 (MQ=255)                                                                ccccTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGccc                                                                      <  1:1500063/150‑1 (MQ=255)                                                                   cTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCa                                                                                                                         <  1:2240546/96‑1 (MQ=255)                                                                   cTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCa                                                                                                                         >  2:2240546/1‑96 (MQ=255)                                                                             aCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAg                                                         >  1:2443110/1‑150 (MQ=255)                                                                                 CCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGta                                                                                                                     <  1:1399941‑M1/86‑1 (MQ=255)                                                                                 CCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGta                                                                                                                     >  2:1399941‑M1/1‑86 (MQ=255)                                                                                   gctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAAGGGCCTTTGCa                                                                                                                         >  2:1598124‑M2/59‑80 (MQ=255)                                                                                   gctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAAGGGCCTTTGCa                                                                                                                         >  2:1596341‑M2/59‑80 (MQ=255)                                                                                   gctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAAGGGCCTTTGCa                                                                                                                         <  1:1598124‑M2/22‑1 (MQ=255)                                                                                   gctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAAGGGCCTTTGCa                                                                                                                         <  1:1596341‑M2/22‑1 (MQ=255)                                                                                     tcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAGGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCt                                                 >  1:9479‑M2/57‑150 (MQ=255)                                                                                     TCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCAtccccc                                                 <  1:377914‑M1/150‑2 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCa                                                                                     >  1:2415614‑M2/55‑112 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCa                                                                                     <  2:2415614‑M2/58‑1 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTcc                                               >  2:2242922‑M2/55‑150 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTccc                                                                                        >  2:1837366‑M2/55‑109 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTccc                                                                                        <  1:1837366‑M2/55‑1 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTc                                                                                      >  2:960881‑M2/55‑111 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTc                                                                                      <  1:960881‑M2/57‑1 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGc                                                                                   <  1:1233837‑M2/60‑1 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGc                                                                                   >  2:1233837‑M2/55‑114 (MQ=255)                                                                                       ccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTcc                                               >  2:2023267‑M2/55‑150 (MQ=255)                                                                                       CCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAGAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCCCCATCGTCCGcatccccccc                                               <  2:28524‑M1/150‑4 (MQ=255)                                                                                       CCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGta                                                                                                                     >  2:1278012‑M1/1‑80 (MQ=255)                                                                                       CCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGta                                                                                                                     <  1:1278012‑M1/80‑1 (MQ=255)                                                                                       CCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCATCCTCCGCAACGCCCCCTCCATCGTCAGCATc                                                     <  1:725425‑M1/144‑1 (MQ=255)                                                                                       CCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATc                                                     >  2:725425‑M1/1‑144 (MQ=255)                                                                                       CCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTcc                                               <  1:811372‑M1/150‑1 (MQ=255)                                                                                       CCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCACGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAAc                                                                          <  1:1477480‑M1/123‑1 (MQ=255)                                                                                       CCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCACGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAAc                                                                          >  2:1477480‑M1/1‑123 (MQ=255)                                                                                        cacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATc                                                     <  1:1653794‑M2/90‑1 (MQ=255)                                                                                        cacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATc                                                     >  2:1653794‑M2/54‑143 (MQ=255)                                                                                        cacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTccg                                              >  1:185553‑M2/54‑150 (MQ=255)                                                                                         acaggtatgtgagctgcgcgcgagagcgacgcgctacccgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAgg                                                                                                                       <  1:811936‑M2/24‑1 (MQ=255)                                                                                         acaggtatgtgagctgcgcgcgagagcgacgcgctacccgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAgg                                                                                                                       >  2:811936‑M2/53‑76 (MQ=255)                                                                                         ACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTccgc                                             <  1:1830364‑M1/150‑1 (MQ=255)                                                                                             tgagctgcgcgcgagagcgacgcgctcacatacctgtgggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCCCCgccgcc                                         >  2:411903‑M2/49‑150 (MQ=255)                                                                                               AGCGCGTCGCTCTCGCGCGGAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTccgccgccac                                       <  1:819369‑M1/150‑3 (MQ=255)                                                                                               AGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGcccc                                       <  2:608409‑M1/150‑1 (MQ=255)                                                                                                  gcgTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCt                                                                                       >  2:1562563/1‑99 (MQ=255)                                                                                                  gcgTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCt                                                                                       <  1:1562563/99‑1 (MQ=255)                                                                                                  gcgTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGccgccccgcc                                    >  1:803919/1‑150 (MQ=255)                                                                                                     tCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTg                                 >  1:1721119/1‑150 (MQ=255)                                                                                                      cGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGc                                <  1:608409/150‑1 (MQ=255)                                                                                                       gCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCa                               >  2:973133/1‑150 (MQ=255)                                                                                                               agagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAGGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGaa                       <  2:9479‑M2/120‑1 (MQ=255)                                                                                                               agagcgacgcgctacctgtgggagcgggcgTGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGaa                       <  1:2242922‑M2/120‑1 (MQ=255)                                                                                                                 gcAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGta                                                                                                                     >  1:1367661/1‑54 (MQ=255)                                                                                                                 gcAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGta                                                                                                                     <  2:1367661/54‑1 (MQ=255)                                                                                                                       cacaTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACtt               >  1:2058561/1‑149 (MQ=255)                                                                                                                        acaTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCcgccccgccc                                   >  1:2328611/1‑129 (MQ=255)                                                                                                                        acaTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCcgccccgccc                                   <  2:2328611/129‑1 (MQ=255)                                                                                                                        acaTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTgc              <  1:973133/150‑1 (MQ=255)                                                                                                                          aTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCa                                                          <  1:12982/104‑1 (MQ=255)                                                                                                                          aTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCa                                                          >  2:12982/1‑104 (MQ=255)                                                                                                                          aTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTgcgc            >  1:578229/1‑150 (MQ=255)                                                                                                                                  tttcgcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGc                                >  1:1930141‑M2/12‑122 (MQ=255)                                                                                                                                  tttcgcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGc                                <  2:1930141‑M2/111‑1 (MQ=255)                                                                                                                                  gggagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGAGCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATAGTCAGCATCCCCTCCGCCGCCCCGCGCTGCATCACTGAGGACGACTGCGCCAACCGcc    <  2:276183‑M2/139‑1 (MQ=255)                                                                                                                                    gagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCGGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGcccc  >  1:619687‑M2/10‑150 (MQ=255)                                                                                                                                    gagcgggcgCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGcccc  <  2:578229‑M2/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                             TGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCC  >  NC_002947/5816833‑5817113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.