New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 275497 =51 (1.180)3 (0.070) 3/244 NT 5.6% coding (451/1386 nt) PP_0222 DszA family monooxygenase
?NC_002947 275525 = 52 (1.250)coding (423/1386 nt) PP_0222 DszA family monooxygenase

ACCGCCAACCTCACCTACGAGGCGCCGTACCTGTTCGCCCGGCGCCTTTCCACACTCGACCACCTGAGCAATGGCCGGGTGGGCTGGAACATTGTCACCGGCTACCTCGACAGCGCTGCCCGGGCCATGGGCCTGGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/275638‑275497
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcGCTGTCGAGGTAGCCGGTGACAATGTTCCAGCCCACCCGGCCATTG  >  NC_002947/275525‑275570
                                                                                                                                                                                              
ACCGCCAACCTCACCTACGAGGCGCCGTACCTGTTCGCCCGGCGCCTTTCCACACTCGACCACCTGAGCAATGGCCGGGTGGGCTGGAACATTGTCACCGGCTACCTCGACAGCGCTGCGCCAGGCCCATGGCCCGGGCAGCGCTGTCGA                                        <  2:522086/150‑1
                                                                                                                      CCCGGGCCATGGGCCTGGCGCAGCGCTGTCGAGGTAGCCGGTGACAATGTTCCAGCCCACCCGGCCATTG  >  1:105691/1‑70
                                                                                                                      CCCGGGCCATGGGCCTGGCGCAGCGCTGTCGAGGTAGCCGGTGACAATGTTCCAGCCCACCCGGCCATTG  <  2:105691/70‑1
                                                                                                                                                                                              
ACCGCCAACCTCACCTACGAGGCGCCGTACCTGTTCGCCCGGCGCCTTTCCACACTCGACCACCTGAGCAATGGCCGGGTGGGCTGGAACATTGTCACCGGCTACCTCGACAGCGCTGCCCGGGCCATGGGCCTGGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/275638‑275497
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcGCTGTCGAGGTAGCCGGTGACAATGTTCCAGCCCACCCGGCCATTG  >  NC_002947/275525‑275570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.