New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1320348	38 (0.880)	3 (0.070)	3/242	NT	7.3%	coding (2389/2586 nt)	PP_1154	sensory box protein
	?	NC_002947	= 1320381	40 (0.970)					coding (2356/2586 nt)	PP_1154	sensory box protein

GCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1320194‑1320348 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCATCATCAACCTGGGCGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGTCGCTGGAAAAGGACCGCTGCCATGAAGTGCAAGG  <  NC_002947/1320381‑1320236                                                                                                                                                                                                                                                                                                               GCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATG                                                                                                                                                         <  2:1040565/150‑1   CGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGC                                                                                                                                                       >  1:925050/1‑150                                        TAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACTCTTTTCACGCTGACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCC                                                                                                                  <  1:569827/150‑1                                                                                                                 TCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAG                                                                                                                <  1:536765/79‑1                                                                                                                 TCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAG                                                                                                                >  2:536765/1‑79                                                                                                                                                      GGCCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCATCATCAACCTGGGCGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGTCGCTGGAAAAGGACCGCTGCCATGAAGTGCAA    <  2:887592/150‑1                                                                                                                                                        CCTGAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCATCATCAACCTGGGCGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGTCGCTGGAAAAGGACCGCTGCCATGAAGTGCAAGG  <  1:771900/150‑1                                                                                                                                                                                                                                                                                                               GCCGTCAACCCGGCGCTGTCCAGGGGCTTGCTCAGGTAATAGCCTTGCACTTCATGGCAGCGGTCCTTTTCCAGCGACTTGAGTTGATGTTCGCTTTCCACGCCTTCGGCTGTCACTGTCAGCCCCATCGCCTCGCCCAGGTTGATGATGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1320194‑1320348 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgAACAACAACGGCGGCAGCGACCGCGCTGTGGTCCAGGCCATCATCAACCTGGGCGAGGCGATGGGGCTGACAGTGACAGCCGAAGGCGTGGAAAGCGAACATCAACTCAAGTCGCTGGAAAAGGACCGCTGCCATGAAGTGCAAGG  <  NC_002947/1320381‑1320236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.