New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2645464 | 27 (0.620) | 3 (0.070) | 3/236 | NT | 10.2% | coding (1893/2499 nt) | PP_2316 | ABC transporter permease |
? | NC_002947 | = 2645496 | 28 (0.700) | coding (1861/2499 nt) | PP_2316 | ABC transporter permease |
AGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2645351‑2645464 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgacgTTCGATATTGGCGGCCAGCAGCGCCAGGCCCGCGTCAGCAGCCTGCGCAACGTGCATTGGGACAGCTTCCAGCCGAACTTCTACATGATCTTCCAGCCTGGCACGCTGCAGGGGCTGCCGACCACTTACCTGACCAGCTTCTACCTG < NC_002947/2645496‑2645350 AGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGTTCGATATTGGCGGCCAGCAGCGCCAGGCCCGCGTC > 2:80136/1‑150 GAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGTTCGATATTGGCGGCCAGCAGCGCCAGGCCCGCGTCAGCAG < 1:80136/150‑1 AAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGTTCGATATTGGCGGCCAGCAGCGCCAGGCCCGCGTCAGCAGC < 1:157333/150‑1 ACGTTCGATATTGGCGGCCAGCAGCGCCAGGCCCGCGTCAGCAGCCTGCGCAACGTGCATTGGGACAGCTTCCAGCCGAACTTCTACATGATCTTCCAGCCTGGCACGCTGCAGGGGCTGCCGACCACTTACCTGACCAGCTTCTACCTG < 2:402495/150‑1 ACGTTCGATATTGGCGGCCAGCAGCGCCAGGCCCGCATCAGCAGCCTGCGCAACGTGCATTGGGACAGCTTCCAGCCGAACTTCTACATGATCTTCCAGCCTGGCACGCTGCAGGGGCTGCCGACCACTTACCTGACCAGCTTCTACCTG > 1:293700/1‑150 AGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2645351‑2645464 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgacgTTCGATATTGGCGGCCAGCAGCGCCAGGCCCGCGTCAGCAGCCTGCGCAACGTGCATTGGGACAGCTTCCAGCCGAACTTCTACATGATCTTCCAGCCTGGCACGCTGCAGGGGCTGCCGACCACTTACCTGACCAGCTTCTACCTG < NC_002947/2645496‑2645350 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |