New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2981909 | 47 (1.080) | 3 (0.070) | 3/244 | NT | 5.9% | coding (499/1734 nt) | PP_2607 | hypothetical protein |
? | NC_002947 | = 2981934 | 51 (1.230) | coding (474/1734 nt) | PP_2607 | hypothetical protein |
AATGCGTTGCCGGTGGTAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2981758‑2981909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccACCGCCCGGCATGCTGCTGTTCGGCGGCATGATG < NC_002947/2981934‑2981901 AATGCGTTGCCGGTGGTAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATG > 1:575562/1‑150 ATGCGTTGCCGGTGGTAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGC > 2:413855/1‑150 TGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCACCGCCCGGCATGCTGCTGTTCGGCGGCATGATG < 2:760676/150‑1 ACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCACCGCCCGGCATGCTGCTGTTCGGCGGCA < 1:956122/111‑1 ACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCACCGCCCGGCATGCTGCTGTTCGGCGGCA > 2:956122/1‑111 AATGCGTTGCCGGTGGTAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2981758‑2981909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccACCGCCCGGCATGCTGCTGTTCGGCGGCATGATG < NC_002947/2981934‑2981901 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |