New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 298190947 (1.080)3 (0.070) 3/244 NT 5.9% coding (499/1734 nt) PP_2607 hypothetical protein
?NC_002947 = 2981934 51 (1.230)coding (474/1734 nt) PP_2607 hypothetical protein

CCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCAGGGCATAACGCAG  >  NC_002947/2981785‑2982071
                                                                                                                                                     |                                                                                                                                         
ccGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGGGCGGCGCATGCTGAAGAAATGATGGCTCTCCACCATCGCGCCCGCGATGCCGCGCAAGAGCAGCATGCCGGGCGGt                                                                                                                                           <  2:11944/150‑1 (MQ=255)
ccGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGt                                                                                                                                           <  2:896751/150‑1 (MQ=255)
         tgctgcAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGc                                                                                                                                  <  1:680788/150‑1 (MQ=255)
            tgcAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAgg                                                                                                                               >  2:1065726/1‑150 (MQ=255)
             gcAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGt                                                                                                                              <  1:612106/150‑1 (MQ=255)
              cAGGCGGTCGCGCGCGTAACGCGCCATAAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTc                                                                                                                             >  1:260591/1‑150 (MQ=255)
                        cgcgcgTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCgt                                                                                                                   <  2:192787/150‑1 (MQ=255)
                         gcgcgTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCgtg                                                                                                                  >  2:105574/1‑150 (MQ=255)
                         gcgcgTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCgtg                                                                                                                  >  1:178621/1‑150 (MQ=255)
                         gcgcgTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCgtg                                                                                                                  >  1:178535/1‑150 (MQ=255)
                                aCGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTTAAGCGTGTGCCCAg                                                                                                           <  1:413855/150‑1 (MQ=255)
                                  gcgcCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATACTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGgc                                                                                                         >  1:627664/1‑150 (MQ=255)
                                     ccATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCt                                                                                                      >  2:451911/1‑150 (MQ=255)
                                          aaCTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCcg                                                                                                 >  1:420846/1‑150 (MQ=255)
                                             ttCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGc                                                                                                                                  >  2:542920/1‑114 (MQ=255)
                                             ttCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGc                                                                                                                                  <  1:542920/114‑1 (MQ=255)
                                             ttCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCcgtcg                                                                                              >  1:940057/1‑150 (MQ=255)
                                              tCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCcgtcgt                                                                                             <  1:82275/150‑1 (MQ=255)
                                                aGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTAc                                                                                           <  2:940057/150‑1 (MQ=255)
                                                    aaTGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGa                                                                                       >  1:293743/1‑150 (MQ=255)
                                                     aTGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGAc                                                                                      <  1:54198/150‑1 (MQ=255)
                                                        ccACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCAt                                                                                   >  1:594749/1‑150 (MQ=255)
                                                        ccACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCAt                                                                                   >  2:1026284/1‑150 (MQ=255)
                                                               gACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGGACTCGACCATTTCCAgc                                                                            <  2:651755/150‑1 (MQ=255)
                                                                aCCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAgcg                                                                           <  1:105574/150‑1 (MQ=255)
                                                                              cgAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGa                                                             <  1:971874/150‑1 (MQ=255)
                                                                               gAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAg                                                            >  2:792683/1‑150 (MQ=255)
                                                                                aaTGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGt                                                           <  1:898912/150‑1 (MQ=255)
                                                                                     tGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCAc                                                      >  1:1029543/1‑150 (MQ=255)
                                                                                      gAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCAcc                                                     >  1:923561/1‑150 (MQ=255)
                                                                                      gAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCAcc                                                     >  1:695670/1‑150 (MQ=255)
                                                                                       aGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCg                                                    <  1:451911/150‑1 (MQ=255)
                                                                                        ggAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCgg                                                   <  2:627664/150‑1 (MQ=255)
                                                                                           aaTGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTg                                                >  1:1052182/1‑150 (MQ=255)
                                                                                               cTGGATATCCACCCGGTTGACCATCAGACCACCGAAAAGCAGCATGCCGGGCGGTGGCATCTGCAAGTCCTTAAAGGGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCCGCGCCGGGCCGAACTGAGTGGCACCGGGTGCagc                                            >  1:1055625/1‑148 (MQ=255)
                                                                                                tGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATcc                                           >  2:421733/1‑150 (MQ=255)
                                                                                                 ggATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGt                                                 <  2:953153/143‑1 (MQ=255)
                                                                                                 ggATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGt                                                 >  1:953153/1‑143 (MQ=255)
                                                                                                  tatatCCTCCCTGTTGACCATCATGCCGCCGAATAGCAGCATGCCGGGCTGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCCACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCgg                                         <  2:260591/149‑1 (MQ=255)
                                                                                                         aCCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGAGGCACCGGGTGCATCCGGGCAATAg                                  >  2:195065/1‑150 (MQ=255)
                                                                                                          cccGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGt                                 >  2:627235/1‑150 (MQ=255)
                                                                                                                  aCCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCgag                         >  2:337255/1‑150 (MQ=255)
                                                                                                                    catcatGCCGCCGAACAGCAGCATGCCGGGCGGTggcatgatggtcaaccgggtggatatccagcatttcctcagcattcgccgctcacccaggtcgctgtggcattgcctgaagttgatggcgcgttacgcgcgcgaccgcctgcagca                       <  2:760676‑M2/150‑117 (MQ=255)
                                                                                                                       catGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTgg                    <  2:293743/150‑1 (MQ=255)
                                                                                                                       catGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTgg                    <  1:616286/150‑1 (MQ=255)
                                                                                                                         tGCCGCCGAACAGCAGCATGCCGGGCGGTggcatgatggtcaaccgggtggatatccagcatttcctcagcattcgccgctcacccaggtcgctgtggcattgcctgaagt                                                         >  2:956122‑M2/1‑29 (MQ=255)
                                                                                                                         tGCCGCCGAACAGCAGCATGCCGGGCGGTggcatgatggtcaaccgggtggatatccagcatttcctcagcattcgccgctcacccaggtcgctgtggcattgcctgaagt                                                         <  1:956122‑M2/111‑83 (MQ=255)
                                                                                                                            cgccgAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGACCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCa               >  2:588211/1‑150 (MQ=255)
                                                                                                                               cgAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCAggg            >  1:240329/1‑150 (MQ=255)
                                                                                                                                gAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATcc                                           >  2:421910/1‑118 (MQ=255)
                                                                                                                                gAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATcc                                           <  1:421910/118‑1 (MQ=255)
                                                                                                                                gAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCAGGGc           >  1:803258/1‑150 (MQ=255)
                                                                                                                                   cagcagCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCgg                                                   >  2:603280/1‑107 (MQ=255)
                                                                                                                                   cagcagCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCgg                                                   <  1:603280/107‑1 (MQ=255)
                                                                                                                                    agcagcATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGGGGGCGCAGGGCATaa       >  2:386442/1‑150 (MQ=255)
                                                                                                                                        gcaTGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCTCAGGCGCTTGCCGTCGTACTCGACCCTTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCAGGGCATAACGCa   <  2:51354/150‑1 (MQ=255)
                                                                                                                                        gcaTGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCAGGGCATAACGCa   <  2:923561/150‑1 (MQ=255)
                                                                                                                                        gcaTGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCAGGGCATAACGCa   <  1:198894/150‑1 (MQ=255)
                                                                                                                                         caTGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACAATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCAGGGCATAACGCAg  <  1:69915/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                         
CCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCAGGGCATAACGCAG  >  NC_002947/2981785‑2982071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.