New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2981909	47 (1.080)	3 (0.070)	3/244	NT	5.9%	coding (499/1734 nt)	PP_2607	hypothetical protein
	?	NC_002947	= 2981934	51 (1.230)					coding (474/1734 nt)	PP_2607	hypothetical protein

TGCGTTGCCGGTGGTAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCA  >  NC_002947/2981760‑2982058                                                                                                                                                      |                                                                                                                                                      tGCGTTGCCGGTGGTAAGCCGGGTGCCGCGAGGGTGACGCCAGATGTCTGGCAGAAAACGCGCCATCAATTGGTTACAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGACATGCGGGAGATCCACCCGGTTGACCATCATgcc                                                                                                                                                       >  1:192787/1‑150 (MQ=255)    gTTGCCGGTGGTAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATGAACTTCAAGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGAACATCATgccgcc                                                                                                                                                    >  2:616286/1‑150 (MQ=255)         cGGTGGTAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAAca                                                                                                                                               >  1:896751/1‑150 (MQ=255)          ggtggtAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAAcag                                                                                                                                              >  1:307124/1‑150 (MQ=255)           gtggtAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAAcagc                                                                                                                                             >  1:651755/1‑150 (MQ=255)                          ccGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGGGCGGCGCATGCTGAAGAAATGATGGCTCTCCACCATCGCGCCCGCGATGCCGCGCAAGAGCAGCATGCCGGGCGGt                                                                                                                              <  2:11944/150‑1 (MQ=255)                          ccGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGt                                                                                                                              <  2:896751/150‑1 (MQ=255)                                   tgctgcAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCaccgcccggcatgctgctgttcggcggcatgatg                                                                                                                     <  2:760676‑M1/150‑35 (MQ=255)                                   tgctgcAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGc                                                                                                                     <  1:680788/150‑1 (MQ=255)                                      tgcAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAgg                                                                                                                  >  2:1065726/1‑150 (MQ=255)                                       gcAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGt                                                                                                                 <  1:612106/150‑1 (MQ=255)                                        cAGGCGGTCGCGCGCGTAACGCGCCATAAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTc                                                                                                                >  1:260591/1‑150 (MQ=255)                                                  cgcgcgTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCgt                                                                                                      <  2:192787/150‑1 (MQ=255)                                                   gcgcgTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCgtg                                                                                                     >  1:178621/1‑150 (MQ=255)                                                   gcgcgTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCgtg                                                                                                     >  1:178535/1‑150 (MQ=255)                                                   gcgcgTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCgtg                                                                                                     >  2:105574/1‑150 (MQ=255)                                                          aCGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTTAAGCGTGTGCCCAg                                                                                              <  1:413855/150‑1 (MQ=255)                                                            gcgcCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATACTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGgc                                                                                            >  1:627664/1‑150 (MQ=255)                                                               ccATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCt                                                                                         >  2:451911/1‑150 (MQ=255)                                                                    aaCTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCcg                                                                                    >  1:420846/1‑150 (MQ=255)                                                                     aCTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCaccgcccggcatgctgctgttcggcggca                                                                                                                          >  2:956122‑M1/1‑82 (MQ=255)                                                                     aCTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCaccgcccggcatgctgctgttcggcggca                                                                                                                          <  1:956122‑M1/111‑30 (MQ=255)                                                                       ttCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGc                                                                                                                     >  2:542920/1‑114 (MQ=255)                                                                       ttCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGc                                                                                                                     <  1:542920/114‑1 (MQ=255)                                                                       ttCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCcgtcg                                                                                 >  1:940057/1‑150 (MQ=255)                                                                        tCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCcgtcgt                                                                                <  1:82275/150‑1 (MQ=255)                                                                          aGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTAc                                                                              <  2:940057/150‑1 (MQ=255)                                                                              aaTGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGa                                                                          >  1:293743/1‑150 (MQ=255)                                                                               aTGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGAc                                                                         <  1:54198/150‑1 (MQ=255)                                                                                  ccACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCAt                                                                      >  2:1026284/1‑150 (MQ=255)                                                                                  ccACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCAt                                                                      >  1:594749/1‑150 (MQ=255)                                                                                         gACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGGACTCGACCATTTCCAgc                                                               <  2:651755/150‑1 (MQ=255)                                                                                          aCCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAgcg                                                              <  1:105574/150‑1 (MQ=255)                                                                                                        cgAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGa                                                <  1:971874/150‑1 (MQ=255)                                                                                                         gAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAg                                               >  2:792683/1‑150 (MQ=255)                                                                                                          aaTGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGt                                              <  1:898912/150‑1 (MQ=255)                                                                                                               tGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCAc                                         >  1:1029543/1‑150 (MQ=255)                                                                                                                gAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCAcc                                        >  1:923561/1‑150 (MQ=255)                                                                                                                gAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCAcc                                        >  1:695670/1‑150 (MQ=255)                                                                                                                 aGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCg                                       <  1:451911/150‑1 (MQ=255)                                                                                                                  ggAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCgg                                      <  2:627664/150‑1 (MQ=255)                                                                                                                     aaTGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTg                                   >  1:1052182/1‑150 (MQ=255)                                                                                                                         cTGGATATCCACCCGGTTGACCATCAGACCACCGAAAAGCAGCATGCCGGGCGGTGGCATCTGCAAGTCCTTAAAGGGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCCGCGCCGGGCCGAACTGAGTGGCACCGGGTGCagc                               >  1:1055625/1‑148 (MQ=255)                                                                                                                          tGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATcc                              >  2:421733/1‑150 (MQ=255)                                                                                                                           ggATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGt                                    >  1:953153/1‑143 (MQ=255)                                                                                                                           ggATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGt                                    <  2:953153/143‑1 (MQ=255)                                                                                                                            tatatCCTCCCTGTTGACCATCATGCCGCCGAATAGCAGCATGCCGGGCTGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCCACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCgg                            <  2:260591/149‑1 (MQ=255)                                                                                                                                   aCCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGAGGCACCGGGTGCATCCGGGCAATAg                     >  2:195065/1‑150 (MQ=255)                                                                                                                                    cccGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGt                    >  2:627235/1‑150 (MQ=255)                                                                                                                                            aCCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCgag            >  2:337255/1‑150 (MQ=255)                                                                                                                                              catcatGCCGCCGAACAGCAGCATGCCGGGCGGTggcatgatggtcaaccgggtggatatccagcatttcctcagcattcgccgctcacccaggtcgctgtggcattgcctgaagttgatggcgcgttacgcgcgcgaccgcctgcagca          <  2:760676‑M2/150‑117 (MQ=255)                                                                                                                                                 catGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTgg       <  2:293743/150‑1 (MQ=255)                                                                                                                                                 catGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTgg       <  1:616286/150‑1 (MQ=255)                                                                                                                                                   tGCCGCCGAACAGCAGCATGCCGGGCGGTggcatgatggtcaaccgggtggatatccagcatttcctcagcattcgccgctcacccaggtcgctgtggcattgcctgaagt                                            <  1:956122‑M2/111‑83 (MQ=255)                                                                                                                                                   tGCCGCCGAACAGCAGCATGCCGGGCGGTggcatgatggtcaaccgggtggatatccagcatttcctcagcattcgccgctcacccaggtcgctgtggcattgcctgaagt                                            >  2:956122‑M2/1‑29 (MQ=255)                                                                                                                                                      cgccgAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGACCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCa  >  2:588211/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      TGCGTTGCCGGTGGTAAGCCGGGTGCCGCGTGGGTGCTGCAGGCGGTCGCGCGCGTAACGCGCCATCAACTTCAGGCAATGCCACAGCGACCTGGGTGAGCGGCGAATGCTGAGGAAATGCTGGATATCCACCCGGTTGACCATCATGCCGCCGAACAGCAGCATGCCGGGCGGTGGCATCTGCAGGTCCTTGAAGCGTGTGCCCAGGCGCTTGCCGTCGTACTCGACCATTTCCAGCGCCCGGCCGAACTGAGTGGCACCGGGTGCATCCGGGTAATAGTCGGGCGAGAGTGGGCGCA  >  NC_002947/2981760‑2982058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.