New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3179966 =	36 (0.830)	5 (0.120)	5/244	NT	12.7%	coding (751/1953 nt)	PP_2790	sigma‑54 dependent sensory box protein
	?	NC_002947	3180013 =	34 (0.820)					coding (704/1953 nt)	PP_2790	sigma‑54 dependent sensory box protein

CTTGCGCAGCTGCTGGACCTGCCGGTTAGCGCAGCGCTGGGCCGGCCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3180017‑3179966 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGACCGCTGCTACGCCGGCGGGGATATGCCGCAGCACGGCATTCAGATGCCGCCGTTTGGCGATCTCGACGCGTTGAGTGTCGAGAATGCCCAGGGCTTCCTCCAGCG  >  NC_002947/3180013‑3180160                                                                                                                                                                                                          CTTGCGCAGCTGCGGGACCTGCCGGTTAGCGCAGCGCTGGGCCGGCCGCTGCGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGACCGCTGCTACGCCGGCGGGGATATGCCGCAGCACGGCATTCAGATGCCGCCGTTT                                                    >  2:856351/1‑150    GCGCAGCTGCTGGACCTGCCGGTTAGCGCAGCGCTGGGCCGGCCGCTGCGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGAC                                                                                                          <  1:833822/93‑1    GCGCAGCTGCTGGACCTGCCGGTTAGCGCAGCGCTGGGCCGGCCGCTGCGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGAC                                                                                                          >  2:833822/1‑93            GCTGGACCTGCCGGTTAGCGCAGCGCTGGGCCGGCCGCTGCGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGACCGCTGCTACGCCGGCGGGGATATGCCGCAGCACGGCATTCAGATGCCGCCGTTTGGCGATCTCGA                                         >  1:240979/1‑150                               GCAGCGCTGGGCCGGCCGCTGCGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGACCGCTGCTACGCCGGCGGGGATATGCCGCAGCACGGCATTCAGATGCCGCCGTTTGGCGATCTCGACGCGTTGAGTGTCGAGAAT                      <  1:856351/150‑1                                                 CTGCGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGACCGCTGCTACGCCGGCGGGGATATGCCGCAGCACGGCATTCAGATGCCGCCAATTTTCGATCTCGACGCGTTGAGTGTCGAGAATGCCCAGGGCTTCCTCCAG    >  2:759031/1‑150                                                  TGCGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGACCGCTGCTACGCCGGCGGGGATATGCCGCAGCACGGCATTCAGATGCCGCCGTTTGGCGATCTCGACGCGTTGAGTGTCGAGAATGCCCAGGGCTTCCTCCAGC   <  2:245091/150‑1                                                   GCGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGACCGCTGCTACGCCGGCGGGGATATGCCGCAGCACGGCATTCAGATGCCGCCGTTTGGCGATCTCGACGCGTTGAGTGTCGAGAATGCCCAGGGCTTCCTCCAGCG  <  2:845910/150‑1                                                                                                                                                                                                          CTTGCGCAGCTGCTGGACCTGCCGGTTAGCGCAGCGCTGGGCCGGCCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3180017‑3179966 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcGCAAGGGCAGGGTTGAGCGACTGCACCACGCCTTGGTTGTCGACCGCTGCTACGCCGGCGGGGATATGCCGCAGCACGGCATTCAGATGCCGCCGTTTGGCGATCTCGACGCGTTGAGTGTCGAGAATGCCCAGGGCTTCCTCCAGCG  >  NC_002947/3180013‑3180160

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.