New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3426005 = | 38 (0.880) | 3 (0.070) | 3/244 | NT | 7.1% | coding (527/612 nt) | PP_3041 | hypothetical protein |
? | NC_002947 | 3426046 = | 42 (1.010) | coding (568/612 nt) | PP_3041 | hypothetical protein |
CAGCCCTCGGCAAAACGCTTCGCGGTACACCTCTGCACCGTTTGCGTATCCGGTGGGCATAGGCTCAGCTCTGTTTAGTGGATTGTTTCTGGCCAATGGCCTGTTCAAGGTCGGAGCTGTTCATGCTGGAGGCTTCGGTGAACACCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3426154‑3426005 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGA > NC_002947/3426046‑3426155 CAGCCCTCGGCAAAACGCTTCGCGGTACACCTCTGCACCGTTTGCGTATCCGGTGGGCATAGGCTCAGCTCTGTTTAGTGGATTGTTTCTGGCCAATGGCCTGTTCAAGGTCGGAGCTGTTCATGCTGGAGGCTTCGGTGAACACCCGAC < 2:433735/150‑1 GGTCGGAGCTGTTCATGCTGGAGGCTTCGGTGAACACCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGAT > 1:222397/1‑104 GGTCGGAGCTGTTCATGCTGGAGGCTTCGGTGAACACCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGAT < 2:222397/104‑1 TCGGAGCTGTTCATGCTGGAGGCTTCGGTGAACACCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGA > 2:1054264/1‑150 CGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTG > 1:508965/1‑113 CGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTG < 2:508965/113‑1 CAGCCCTCGGCAAAACGCTTCGCGGTACACCTCTGCACCGTTTGCGTATCCGGTGGGCATAGGCTCAGCTCTGTTTAGTGGATTGTTTCTGGCCAATGGCCTGTTCAAGGTCGGAGCTGTTCATGCTGGAGGCTTCGGTGAACACCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3426154‑3426005 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGA > NC_002947/3426046‑3426155 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |