| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3426005 = | 38 (0.880) | 3 (0.070) | 3/244 | NT | 7.1% | coding (527/612 nt) | PP_3041 | hypothetical protein |
| ? | NC_002947 | 3426046 = | 42 (1.010) | coding (568/612 nt) | PP_3041 | hypothetical protein | |||||
ATGCTTCGCGAGCAGTTTTTCGGCCTGGCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGATCTATGGGTCGACGAGTGGGCAGATGA > NC_002947/3425902‑3426195 | aTGCTTCGCGAGCAGTTTTTCGGCCTGGCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGaa < 1:1087001/150‑1 (MQ=255) gCTTCGCGAGCAGTTTTTCGGCCTGGCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGCCCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCTACCTTGAACa > 2:481645/1‑150 (MQ=255) ttCGCGAGCAGTTTTTCGGCCTGGCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAgg < 1:60631/150‑1 (MQ=255) aGCAGTTTTTCGGCCTGGCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTg < 1:418706/150‑1 (MQ=255) cAGTTTTTCGGCCTGGCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACCGCTCCGTCCTTGAACAGGCCATTGGc < 2:542634/150‑1 (MQ=255) tCGGCCTGGCTCCGCAGCTAGCTGGCGGAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAAc < 1:935543/150‑1 (MQ=255) ccTGGCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATc < 1:355514/150‑1 (MQ=255) tGGCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCa < 2:288929/150‑1 (MQ=255) gCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAACCAATACACt > 1:501376/1‑150 (MQ=255) tCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTaa > 2:914573/1‑150 (MQ=255) tCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTaa > 1:632103/1‑150 (MQ=255) gctagctGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACagag < 2:223586/150‑1 (MQ=255) gctGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATc > 2:902589/1‑134 (MQ=255) gctGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATc < 1:902589/134‑1 (MQ=255) atccggtgggcataggctcagctctgtttagtggattgtttctggccaatggcctgttcaagGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGAcc > 1:222397‑M1/63‑104 (MQ=255) atccggtgggcataggctcagctctgtttagtggattgtttctggccaatggcctgttcaagGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGAcc < 2:222397‑M1/42‑1 (MQ=255) cTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACgg > 2:1056385/1‑150 (MQ=255) tgGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGc > 1:209424/1‑150 (MQ=255) gAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGa < 2:629084/133‑1 (MQ=255) gAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGa > 1:629084/1‑133 (MQ=255) gagaGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCCACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTa < 1:230588/150‑1 (MQ=255) gCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCAc > 1:180837/1‑118 (MQ=255) gCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCAc < 2:180837/118‑1 (MQ=255) aCCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAcaca > 2:68376/1‑97 (MQ=255) aCCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACa < 1:68376/97‑1 (MQ=255) ccTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATc > 1:1057610/1‑87 (MQ=255) ccTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATc < 2:1057610/87‑1 (MQ=255) cTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCAATAAACAGAGATGAGCATATGCAAACCGAATACTCAAACGGTGCAGAGGTGTACCGCGAAGc > 2:121713/1‑150 (MQ=255) tCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCg > 1:89988/1‑150 (MQ=255) acTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCg > 1:48701/1‑150 (MQ=255) tttCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAg < 2:771387/150‑1 (MQ=255) ggtcggagctgttcatgctggaggcttcggtgaacacccgacCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGAt > 1:222397‑M2/43‑104 (MQ=255) ggtcggagctgttcatgctggaggcttcggtgaacacccgacCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGAt < 2:222397‑M2/62‑1 (MQ=255) GTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTg < 2:433735‑M1/150‑1 (MQ=255) tcggagctgttcatgctggaggcttcggtgaacacccgacCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGa > 2:1054264‑M2/41‑150 (MQ=255) gtgtTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCGACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGGCGcc > 2:288538/1‑150 (MQ=255) tgtTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGccc < 2:632103/150‑1 (MQ=255) ccGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGaa > 2:153708/1‑120 (MQ=255) ccGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGaa < 1:153708/120‑1 (MQ=255) cGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATg < 1:913227/80‑1 (MQ=255) cGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATg > 2:913227/1‑80 (MQ=255) aaGCCTCCAGCATGAACAGCTCCTACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGAt < 1:481645/150‑1 (MQ=255) gCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGATCt > 2:344151/1‑150 (MQ=255) cTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGATCTAt < 2:48701/150‑1 (MQ=255) tCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGATCTATg > 1:708881/1‑150 (MQ=255) ccAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGATCTATgg < 1:433735/150‑1 (MQ=255) ccAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGATCTATgg < 1:344151/150‑1 (MQ=255) tGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGATCTATGGGTcgac < 2:708881/150‑1 (MQ=255) cgacCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTg < 2:508965‑M2/109‑1 (MQ=255) cgacCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTg > 1:508965‑M2/5‑113 (MQ=255) cTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGATCTATGGGTCGACGAGTGGGCAGATGa < 1:531709/150‑1 (MQ=255) | ATGCTTCGCGAGCAGTTTTTCGGCCTGGCTCCGCAGCTAGCTGGCGAAGTAGTCGGGATGAGCGACCTGTGGGAAGTCGAGAGGCACCTCACTGACACTTTCCGTCGGGTGTTCACCGAAGCCTCCAGCATGAACAGCTCCGACCTTGAACAGGCCATTGGCCAGAAACAATCCACTAAACAGAGCTGAGCCTATGCCCACCGGATACGCAAACGGTGCAGAGGTGTACCGCGAAGCGTTTTGCCGAGGGCTGACGCCCGACCCTGATCTATGGGTCGACGAGTGGGCAGATGA > NC_002947/3425902‑3426195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |