| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3427898 | 49 (1.130) | 4 (0.100) | 4/244 | NT | 8.2% | coding (1804/2037 nt) | PP_3042 | terminase large subunit |
| ? | NC_002947 | = 3427919 | 43 (1.030) | coding (1825/2037 nt) | PP_3042 | terminase large subunit | |||||
GAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3427820‑3427898‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggCCAGCGCCTGCCGCAGCTTGTCCCAGTCGTGTTCGCCATACCGGTGCAGCCCGAGGAAGTAAGCCATGGCCAGGTTGTACACCATGAGGTCCAGCGCCTCGTTGCGCTCGGCCTTGCTCTTGACCCATTCGAACCGTTCGTGCCCCT < NC_002947/3427919‑3427773 GAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGCCAGCGCCTGCCGCAGCTTGTCCCAGTCGTGTTCGCCATA < 1:945083/119‑1GAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGCCAGCGCCTGCCGCAGCTTGTCCCAGTCGTGTTCGCCATA > 2:945083/1‑119 CTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGCCAGCGCCTGCCGCAGCTTGTCCCAGTCGT < 1:822555/97‑1 CTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGCCAGCGCCTGCCGCAGCTTGTCCCAGTCGT > 2:822555/1‑97 CTGGGCCAGCGCCTGCCGCAGCTTGTCCCAGTCGTGTTCGCCATACCGGTGCAGCCCGAGGAAGTAAGCCATGGCCAGGTTGTACACCATGAGGTCCAGCGCCTCGTTGCGCTCGGCCTTGCTCTTGACCCATTCGAACCGTTCGTGCCC < 1:495427/150‑1 GGGCCAGCGCCTGCCGCAGCTTGTCCCAGTCGTGTTCGCCATACCGGTGCAGCCCGAGGAAGTAAGCCATGGCCAGGTTGTACACCATGAGGTCCAGCGCCTCGTTGCGCTCGGCCTTGCTCTTGACCCATTCGAACCGTTCGTGCCCCT > 2:1121187/1‑150 GAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3427820‑3427898‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggCCAGCGCCTGCCGCAGCTTGTCCCAGTCGTGTTCGCCATACCGGTGCAGCCCGAGGAAGTAAGCCATGGCCAGGTTGTACACCATGAGGTCCAGCGCCTCGTTGCGCTCGGCCTTGCTCTTGACCCATTCGAACCGTTCGTGCCCCT < NC_002947/3427919‑3427773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |