| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3427898 | 49 (1.130) | 4 (0.100) | 4/244 | NT | 8.2% | coding (1804/2037 nt) | PP_3042 | terminase large subunit |
| ? | NC_002947 | = 3427919 | 43 (1.030) | coding (1825/2037 nt) | PP_3042 | terminase large subunit | |||||
AGGGGCACGAACGGTTCGAATGGGTCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCAGTTTCACCGCCAACACCACCGGCTCGGCCCGCTCCACG > NC_002947/3427773‑3428049 | aGGGGCACGAACGGTTCGAATGGGTCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGccc > 2:1121187‑M2/1‑147 (MQ=255) gggCACGAACGGTTCGAATGGGTCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGcccag < 1:495427‑M2/150‑6 (MQ=255) gCACGAACGGTTCGAATGGGTCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGc > 2:983976/1‑150 (MQ=255) aCGAACGGTTCGAATGGGTCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGa < 2:1095013/150‑1 (MQ=255) ggTTCGAATGGGTCAAGAGCAAGGCCGAGCGCAACGGGGCGCTGGGCCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGt < 2:910310/150‑1 (MQ=255) ggTTCGAATGGGTCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGt < 1:983976/150‑1 (MQ=255) ggTCAAGATCAAGGCCGAGCGCAACGAGGCGCTGTACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGcc < 2:518315/150‑1 (MQ=255) ggTCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGcc < 2:947901/150‑1 (MQ=255) gTCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCg > 1:508181/1‑150 (MQ=255) tCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGt > 1:1016797/1‑150 (MQ=255) tCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGt > 1:476850/1‑150 (MQ=255) tCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCGGAACTGGCCCGAAGTCAGCATATTCCTTAAGCTGCGGCAGGCGCTGGCCCAGGCGAGGCTGTTtgatgatcggt > 1:976187/1‑145 (MQ=255) aaGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGcc > 1:1042069/1‑146 (MQ=255) aaGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGcc < 2:1042069/146‑1 (MQ=255) aGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGa > 1:1041696/1‑150 (MQ=255) aGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAAc < 2:476850/150‑1 (MQ=255) aGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAAc < 2:846892/150‑1 (MQ=255) gcgcAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAAcc < 2:495427/150‑1 (MQ=255) aaCGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGCCTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTc < 2:999735/150‑1 (MQ=255) gcTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGcc > 2:385564/1‑149 (MQ=255) cTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCAc < 1:532131/150‑1 (MQ=255) tCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACg > 2:221858/1‑150 (MQ=255) tCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGACGGCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACg > 1:232545/1‑150 (MQ=255) cATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGa < 2:508181/150‑1 (MQ=255) aTGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGAt < 2:976187/150‑1 (MQ=255) cAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTtga > 1:486829/1‑96 (MQ=255) cAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTtga < 2:486829/96‑1 (MQ=255) cAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGAcgacga < 1:90079/150‑1 (MQ=255) aaCCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGa > 1:220300/1‑128 (MQ=255) aaCCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGa < 2:220300/128‑1 (MQ=255) aCCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTcc > 1:557917/1‑106 (MQ=255) aCCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTcc < 2:557917/106‑1 (MQ=255) aCCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATg > 2:1020841/1‑150 (MQ=255) cTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCAc < 1:389360/129‑1 (MQ=255) cTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCAc > 2:389360/1‑129 (MQ=255) ggCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGAccc < 1:1870/150‑1 (MQ=255) aTGGCTTAATTCCTCGGGCTGCACCGGTAAGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGAGCAGGCGAGTCTGTCTGATGAGCCGTCTCCTGCGAAGCAACCGGTAGTTGAGCACCAACACGAGGACGACGATGACACGgac > 2:32337/1‑150 (MQ=255) cTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGacgacg > 1:815783/1‑150 (MQ=255) ttCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCa > 1:429487/1‑150 (MQ=255) ttCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCa < 1:221858/150‑1 (MQ=255) tCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCAg < 2:1041696/150‑1 (MQ=255) tATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGcccagtcgtgttcgccataccggtgcagcccgaggaagtaagccatggccaggttgtacaccatgaggtccagcgcctc > 2:945083‑M2/1‑40 (MQ=255) tATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGcccagtcgtgttcgccataccggtgcagcccgaggaagtaagccatggccaggttgtacaccatgaggtccagcgcctc < 1:945083‑M2/119‑80 (MQ=255) gAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCAGTTTCACCGCCAACACCACCGGCt > 1:643923/1‑150 (MQ=255) cacGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCAGTTTCACCGCCAACACCACCGGCTCgg < 1:573099/150‑1 (MQ=255) acGACTGGGACAAGCTGCGGCAGGCGCTGGcccagtcgtgttcgccataccggtgcagcccgaggaagtaagccatggccaggttgtacaccatgag > 2:822555‑M2/1‑30 (MQ=255) acGACTGGGACAAGCTGCGGCAGGCGCTGGcccagtcgtgttcgccataccggtgcagcccgaggaagtaagccatggccaggttgtacaccatgag < 1:822555‑M2/97‑68 (MQ=255) acGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCAGTTTCACCGCCAACACCACCGGCTCGGc < 2:815783/150‑1 (MQ=255) gACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCAGTTTCACCGCCAACACCACCGGCTCGGccc > 1:276807/1‑150 (MQ=255) gACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCAGTTTCACCGCCAACACCACCGGCTCGGCCcgctcca > 1:739472/1‑150 (MQ=255) cAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCAGTTTCACCGCCAACACCACCGGCTCGGCCcgctccacg > 2:1047208/1‑150 (MQ=255) | AGGGGCACGAACGGTTCGAATGGGTCAAGAGCAAGGCCGAGCGCAACGAGGCGCTGGACCTCATGGTGTACAACCTGGCCATGGCTTACTTCCTCGGGCTGCACCGGTATGGCGAACACGACTGGGACAAGCTGCGGCAGGCGCTGGCCCAGGCGAGTCTGTTTGATGAGCCGTCTCCTGCGAAGCAACCGGTCGTTGAGCACCAACACGATGACGACGATGACCCGGACGACGATCCAGTTTCACCGCCAACACCACCGGCTCGGCCCGCTCCACG > NC_002947/3427773‑3428049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |