New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5046227 =	32 (0.740)	3 (0.070)	3/242	NT	8.2%	coding (137/627 nt)	PP_4450	phosphoglycerate mutase family protein
	?	NC_002947	5046271 =	37 (0.900)					coding (181/627 nt)	PP_4450	phosphoglycerate mutase family protein

GAGCGACTGTGGTATCGACGCAACGCGCGGGTGCGAGGTAAGTGAACTCTTGGATTGGCCATGTCTCAATCGCCACGGTGGGGAAGATGGCGGATGTCTCCTGTGCTGTCGCCTGGGCCCGTGAGAAAGGTGAAGCCACGATGAGCTCAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5046379‑5046227 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGATACCACAGTCGCTCAACGACGGGATTGGGTGGATGCGTATTGGGCGAGA  >  NC_002947/5046271‑5046414                                                                                                                                                                                                                                                                                                           GAGCGACTGTGGTATCGACGCAACGCGCGGGTGCGAGGTAAGTGAACTCTTGGATTGGCCATGTCTCAATCGCCACGGTGGGGAAGATGGCGGATGTCTCCTGTGCTGTCGCCTGGGCCCGTGAGAAAGGTGAAGCCACGATGAGCTCAG                                                                                                                                                     <  1:245542/150‑1   GCGACTGTGGTATCGACGCAACGCGCGGGTGCGAGGTAAGTGAACTCTTGGATTGGCCATGTCTCAATCGCCACGGTGGGGAAGATGGCGGATGTCTCCTGTGCTGTCGCCTGGGCCCGTGAGAAAGGTGAAGCCACGATGAGCTCAGGC                                                                                                                                                   <  1:444900/150‑1                                                                                                          CTGTCGCCTGGGCCCGTGAGAAAGGTGAAGCCACGATGAGCTCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGATACCACA                                            >  1:1088105/1‑150                                                                                                                CCTGGGCCCGTGAGAAAGGTGAAGCCACGATGAGCTCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGA                                                                                    <  1:517924/104‑1                                                                                                                CCTGGGCCCGTGAGAAAGGTGAAGCCACGATGAGCTCAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGA                                                                                    >  2:517924/1‑104                                                                                                                                                    CAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGATACCACAGTCGCTCAACGACGGGATTGGGTGGATGCGTATTGGGCGAGA  <  1:925597/150‑1                                                                                                                                                    CAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGATACCACAGTCGCTCAACGACGGGATTGGGTGGATGCGTATTGG        <  1:734084/144‑1                                                                                                                                                    CAGGCGACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGATACCACAGTCGCTCAACGACGGGATTGGGTGGATGCGTATTGG        >  2:734084/1‑144                                                                                                                                                                                                                                                                                                           GAGCGACTGTGGTATCGACGCAACGCGCGGGTGCGAGGTAAGTGAACTCTTGGATTGGCCATGTCTCAATCGCCACGGTGGGGAAGATGGCGGATGTCTCCTGTGCTGTCGCCTGGGCCCGTGAGAAAGGTGAAGCCACGATGAGCTCAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5046379‑5046227 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgACAGCACAGGAGACATCCGCCATCTTCCCCACCGTGGCGATTGAGACATGGCCAATCCAAGAGTTCACTTACCTCGCACCCGCGCGTTGCGTCGATACCACAGTCGCTCAACGACGGGATTGGGTGGATGCGTATTGGGCGAGA  >  NC_002947/5046271‑5046414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.