| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5418129 | 34 (0.780) | 3 (0.070) | 3/238 | NT | 8.2% | coding (990/1368 nt) | PP_4758 | MFS transporter |
| ? | NC_002947 | = 5418145 | 35 (0.860) | coding (974/1368 nt) | PP_4758 | MFS transporter | |||||
CGCCGCAGCGATGCGGGCGTCCAGATAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5417973‑5418129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaggCCTGGGTGGCCGGCGCCCTGCTGGTCGCTGCCACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGGGCTA < NC_002947/5418145‑5417998 CGCCGCAGCGATGCGGGCGTCCAGATAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGAC < 1:779062/150‑1 GCAGCGATGCGGGCGTCCAGATAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGCCCAGC > 1:558701/1‑150 CAGCGATGCGGGCGTCCAGATAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGACGCAGATAGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCA < 1:134836/150‑1 AGCGATGCGGGCGTCCAGATAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAG < 2:1098999/150‑1 ATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGCCTGGGTGGCCGGCGCCCTGCTGGTCGCTG < 2:107507/150‑1 GATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGCCTGGGTGGCCGGCGCCCTGCTGG < 1:547636/109‑1 GATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGCCTGGGTGGCCGGCGCCCTGCTGG > 2:547636/1‑109 AGCAGGCCTGGGTGGCCGGCGCCCTGCTGGTCGCTGCCACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGG > 2:267341/1‑150 GCAGGCCTGTGTGACCGGCGCCCTGCTGGTCGCTGCCACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGGG < 1:785224/150‑1 GCAGGCCTGGGTGGCCGGCGCCCTGCTGGTCGCTGCCACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCACTCACCCcgcg > 2:737850/1‑146 GGCCTGGGTGGCCGGCGCCCTGCTGGTCGCTGCCACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGGGCTA < 2:394785/150‑1 CGCCGCAGCGATGCGGGCGTCCAGATAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5417973‑5418129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaggCCTGGGTGGCCGGCGCCCTGCTGGTCGCTGCCACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGGGCTA < NC_002947/5418145‑5417998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |