New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5418129 | 34 (0.780) | 3 (0.070) | 3/238 | NT | 8.2% | coding (990/1368 nt) | PP_4758 | MFS transporter |
? | NC_002947 | = 5418145 | 35 (0.860) | coding (974/1368 nt) | PP_4758 | MFS transporter |
TAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGT > NC_002947/5417998‑5418290 | tAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGcc < 2:394785‑M2/150‑3 (MQ=255) cgcggggtgagtgGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGcctgc > 2:737850‑M2/5‑145 (MQ=255) cccTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGTCACACAGGcctgc < 1:785224‑M2/150‑6 (MQ=255) ccTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGcctgct > 2:267341‑M2/1‑144 (MQ=255) ggggATTGGGCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGaa < 1:954169/150‑1 (MQ=255) ggggATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGaa < 2:748530/150‑1 (MQ=255) gCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGCACTTCCagg > 2:114878/1‑149 (MQ=255) gCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCagc > 2:466929/1‑150 (MQ=255) gTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAAc > 1:163608/1‑150 (MQ=255) gACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAg < 2:898991/150‑1 (MQ=255) ttGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCg > 1:1116895/1‑150 (MQ=255) ttGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGACTAAGGCg > 1:597137/1‑150 (MQ=255) tGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGt < 1:394785/150‑1 (MQ=255) tGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGt < 1:391694/150‑1 (MQ=255) cgcgGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAg < 1:814037/150‑1 (MQ=255) cggcgAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGa < 1:556706/150‑1 (MQ=255) gCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGAt < 2:163608/150‑1 (MQ=255) gCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCaa < 2:356603/150‑1 (MQ=255) aaGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAAGTTCCag > 1:49301/1‑93 (MQ=255) aaGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAAGTTCCag < 2:49301/93‑1 (MQ=255) aGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCg < 1:894974/150‑1 (MQ=255) gCAAACACCGCCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAg < 1:498801/150‑1 (MQ=255) aaaCACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAgg > 1:772736/1‑71 (MQ=255) aaaCACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAgg < 2:772736/71‑1 (MQ=255) cacCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGTCAGCCAATGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTgaa < 1:757915/150‑1 (MQ=255) cATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTACTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACt < 2:225079/150‑1 (MQ=255) gAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAg > 2:1012495/1‑150 (MQ=255) aaCATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAAc > 1:863854/1‑130 (MQ=255) aaCATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAAc < 2:863854/130‑1 (MQ=255) aCATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGt > 2:138978/1‑150 (MQ=255) aTGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCg > 1:104754/1‑150 (MQ=255) ccGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCa < 2:1079930/99‑1 (MQ=255) ccGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCa > 1:1079930/1‑99 (MQ=255) ccGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCAt < 2:699817/133‑1 (MQ=255) ccGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCAt > 1:699817/1‑133 (MQ=255) gTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATa < 2:1116895/150‑1 (MQ=255) cAGCGACCAGCAGGGCGCCGGCCACCCAGGcctgctggtcgctgccacgggcatgttcatgtccaccacgggtgggccggtgtttgccttcgtcgccgtgtgcttcgccgcgatcggcttcaagtcagcgtcgtcactgttctggccaat < 2:107507‑M2/150‑121 (MQ=255) aGCGACCAGCAGGGCGCCGGACACCCAGGCCTGCTGGAACTTCCCGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGAGCAGCCAAGGGATCGAGTTGAAGAACCCGACCTGCATGTCACTGAGGTCGCCCATACGCtt < 2:1005484/150‑1 (MQ=255) ccAGCAGGGCGCCGGCCACCCAGGcctgctggtcgctgccacgggcatgttcatgtccaccacgggtgggccggtgtttgccttcgtcgccgtgtgcttcgccgcgatc > 2:547636‑M2/1‑24 (MQ=255) ccAGCAGGGCGCCGGCCACCCAGGcctgctggtcgctgccacgggcatgttcatgtccaccacgggtgggccggtgtttgccttcgtcgccgtgtgcttcgccgcgatc < 1:547636‑M2/109‑86 (MQ=255) cagGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCt < 2:968704/150‑1 (MQ=255) gcgcCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGc < 1:1012495/150‑1 (MQ=255) ccGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGc > 1:114621/1‑150 (MQ=255) ggCCACCCAGGTCTGCTGGAACGTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACGGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCa < 2:785224/150‑1 (MQ=255) ccccAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAg < 2:1047577/149‑1 (MQ=255) cccAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAgg > 1:776769/1‑150 (MQ=255) ccAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGt < 2:114621/150‑1 (MQ=255) | TAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGT > NC_002947/5417998‑5418290 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |