New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2588895	37 (0.850)	4 (0.100)	4/244	NT	10.5%	coding (2217/2559 nt)	PP_2266	DNA‑directed RNA polymerase
	?	NC_002947	= 2588913	33 (0.790)					coding (2235/2559 nt)	PP_2266	DNA‑directed RNA polymerase

GGTGTGCTGGACCACTGCCGTGGGCTTCCCGGTGATGCAGGCGTACAACTCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACAGCTTCGGCACCACCGCAGGGGAGACCGAGCTTTTCTTCA  >  NC_002947/2588766‑2589061                                                                                                                                                    |                                                                                                                                                     ggTGTGCTGGACCACTGCCGTGGGCTTCCCGGTGATGCAGGCGTACAACTCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGca                                                                                                                                                    <  2:672397‑M2/150‑3 (MQ=255)            ccACTGCCGTGGGCTTCCCGGTGATGCAGGCGTACAACTCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGcc                                                                                                                                         >  1:1054917/1‑150 (MQ=255)              aCTGCCGTGGGCTTCCCGGTGATGCAGGCGTACCACTCCGGGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGcccc                                                                                                                                       >  2:1121221/1‑150 (MQ=255)                    gTGGGCTTCCCGGTGATGCAGGCGTACAACTCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGGGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTc                                                                                                                                 <  2:13060/150‑1 (MQ=255)                      gcgcctCCCGGTGCGGCAGACGTACAGCTCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGt                                                                                                                               <  2:451662/145‑1 (MQ=255)                                         gCGTACAACTCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGcc                                                                                                            >  1:918808/1‑150 (MQ=255)                                         gCGTACAACTCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGcc                                                                                                            >  1:350080/1‑150 (MQ=255)                                           gTACAACTCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGACCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGAGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCa                                                                                                          >  1:1050541/1‑150 (MQ=255)                                                  tCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATg                                                                                                   <  2:1107775/150‑1 (MQ=255)                                                   ccGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGc                                                                                                  <  2:802579/150‑1 (MQ=255)                                                            cTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTtg                                                                                         <  1:672397/150‑1 (MQ=255)                                                             tCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTtgt                                                                                        >  2:534171/1‑150 (MQ=255)                                                                    gTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTgcgtggc                                                                                 >  2:1047876/1‑150 (MQ=255)                                                                      aaaaaCGGCCATCAACGGGGCCTGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCACCTTCGTCCATAGCTGCGATGCGGCCCACATCATGCTCACCGTTGTgcgtggcgt                                                                               <  1:27409/149‑1 (MQ=255)                                                                       aaaaCGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAATAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTgcgtggcgtg                                                                              <  1:237886/150‑1 (MQ=255)                                                                               cATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCgg                                                                      >  2:175548/1‑150 (MQ=255)                                                                                aTCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATc                                                                                                                                             <  1:346164/78‑1 (MQ=255)                                                                                aTCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATc                                                                                                                                             >  2:346164/1‑78 (MQ=255)                                                                                aTCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGc                                                                     >  1:415069/1‑150 (MQ=255)                                                                                    aCGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGa                                                                 <  2:415069/150‑1 (MQ=255)                                                                                     cGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGaa                                                                <  2:356830/150‑1 (MQ=255)                                                                                        ggCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGcag                                                                                                                                                   <  1:805195‑M2/64‑4 (MQ=255)                                                                                        ggCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGcag                                                                                                                                                   >  2:805195‑M2/1‑61 (MQ=255)                                                                                                   gcatactGATGACCGAAGAGCAAGACGCCGTGGGCAAGCGCAAGCAGTGGCAGGGGATCCGCCCCAACGTCGTCCATAGCTGCGAGGCGGCCCACCCCATGCTCACCGTTGGGCGTGGCGTGGAGTCCGGCTTGCAGAGCTTCGCgatga                                                  >  2:67578/6‑150 (MQ=255)                                                                                                      tcctGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTc                                                                                                                              >  1:1086792/1‑71 (MQ=255)                                                                                                      tcctGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTc                                                                                                                              <  2:1086792/71‑1 (MQ=255)                                                                                                       cctGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCa                                              <  2:350080/150‑1 (MQ=255)                                                                                                       cctGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCa                                              <  1:534171/150‑1 (MQ=255)                                                                                                           atgaACGACGCGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGAACCTAGTTGGTAAATATCTGTGACGACACCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGAc                                          <  1:79033/150‑1 (MQ=255)                                                                                                            tgaACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACa                                         <  2:958910/150‑1 (MQ=255)                                                                                                                cGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACAGCtt                                     <  1:149014/150‑1 (MQ=255)                                                                                                                       cAAGACGCCCTGGACAAGCGCAAGCAGTCGcagggcgtcttgctcttcgttcatcaggaggcgcacacgggccccgttga                                                                                                    >  1:1005721‑M2/1‑30 (MQ=255)                                                                                                                       cAAGACGCCCTGGACAAGCGCAAGCAGTCGcagggcgtcttgctcttcgttcatcaggaggcgcacacgggccccgttga                                                                                                    <  2:1005721‑M2/80‑51 (MQ=255)                                                                                                                         aGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACAGCTTCGGcaccac                            >  2:739627/1‑150 (MQ=255)                                                                                                                             gCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGaa                                                                >  2:333357/1‑110 (MQ=255)                                                                                                                             gCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGaa                                                                <  1:333357/110‑1 (MQ=255)                                                                                                                               ccTGGACAAGCGCAAGCAGTCGcagggcgtcttgctcttcgttcatcaggaggcgcacacgggccccgttgatggccgttttgacgcggcga                                                                                >  2:963677‑M2/1‑22 (MQ=255)                                                                                                                               ccTGGACAAGCGCAAGCAGTCGcagggcgtcttgctcttcgttcatcaggaggcgcacacgggccccgttgatggccgttttgacgcggcga                                                                                <  1:963677‑M2/92‑71 (MQ=255)                                                                                                                                        gcgcAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACAGCTTCGGCACCACCGCAGGGGAGACCGa             >  2:453608/1‑150 (MQ=255)                                                                                                                                         cgcAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACAGCTTCGGCACCACCGCAGGGGAGACCGAg            >  1:35936/1‑150 (MQ=255)                                                                                                                                          gcAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGGGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACAGCTTCGGCACCACCGCAGGGGAGACCGAGc           <  1:1121221/150‑1 (MQ=255)                                                                                                                                            aaGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACAGCTTCGGCACCACCGCAGGGGAGACCGAGCtt         >  2:274273/1‑150 (MQ=255)                                                                                                                                                   cGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACAGCTTCGGCACCACCGCAGGGGAGACCGAGCTTTTCTTCa  <  2:1054917/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GGTGTGCTGGACCACTGCCGTGGGCTTCCCGGTGATGCAGGCGTACAACTCCGTGGTAGCTCGCCGCGTCAAAACGGCCATCAACGGGGCCCGTGTGCGCCTCCTGATGAACGAAGAGCAAGACGCCCTGGACAAGCGCAAGCAGTCGCAGGGGATCAGCCCCAACTTCGTCCATAGCTGCGATGCGGCCCACCTCATGCTCACCGTTGTGCGTGGCGTGGAGTCCGGCTTGAAGAGCTTCGCGATGATCCATGACAGCTTCGGCACCACCGCAGGGGAGACCGAGCTTTTCTTCA  >  NC_002947/2588766‑2589061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.