| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 161086 | 40 (0.760) | 6 (0.120) | 5/230 | NT | 12.9% | intergenic (‑51/+39) | PP_0151/PP_0152 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 161100 | 44 (0.900) | intergenic (‑65/+25) | PP_0151/PP_0152 | hypothetical protein/hypothetical protein | |||||
TGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/160978‑161086‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtgcgTTGGCTTCGGCCCTCGCACCTGAGGTAGGCTTCGCCGTTCATTTTTCCAGCCTTCAAGAAAGCTCATGCGTTATCTGTTGCCATTGCTGTTCGCCGCCGCAGGCATGGCCAGCGCCCATGCCATGGATACCACCACACAAAGCCTGGTC < NC_002947/161100‑160952 TGGCATGGGCGCTGGCCATGCCTGCGGCGTCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGTTGGCTTCGGCCCTCGCACCTGAGGT < 1:156859/135‑1TGGCATGGGCGCTGGCCATGCCTGCGGCGTCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGTTGGCTTCGGCCCTCGCACCTGAGGT > 2:156859/1‑135 GCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGTTGGCTTCGGCCCTCGCAC > 1:908338/1‑68 GCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGTTGGCTTCGGCCCTCGCAC < 2:908338/68‑1 TTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGTTGGCTTCGGCCCTCGCAC < 1:562848/62‑1 TTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGTTGGCTTCGGCCCTCGCAC > 2:562848/1‑62 AGGTGCGTTGGCTTCGGCCCTCGCACCTGAGGTAGGCTTCGCCGTTCATTTTTCCAGCCTTCAAGAAAGCTCATGCGTTATCTGTTGCCATTGCTGTTCGCCGCCGCAGGCATGGCCAGCGCCCATGCCATGGATACCACCACACAAAGC < 2:1138798/150‑1 GTTGGCTTCGGCCCTCGCACCTGAGGTAGGCTTCGCCGTTCATTTTTCCAGCCTTCAAGAAAGCTCATGCGTTATCTGTTGCCATTGCTGTTCGCCGCCGCAGGCATGGCCAGCGCCCATGCCATGGATACCACCACACAAAGCCTGGTC < 1:1045710/150‑1 TGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/160978‑161086‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtgcgTTGGCTTCGGCCCTCGCACCTGAGGTAGGCTTCGCCGTTCATTTTTCCAGCCTTCAAGAAAGCTCATGCGTTATCTGTTGCCATTGCTGTTCGCCGCCGCAGGCATGGCCAGCGCCCATGCCATGGATACCACCACACAAAGCCTGGTC < NC_002947/161100‑160952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |