New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 161086	40 (0.760)	6 (0.120)	5/230	NT	12.9%	intergenic (‑51/+39)	PP_0151/PP_0152	hypothetical protein/hypothetical protein
	?	NC_002947	= 161100	44 (0.900)					intergenic (‑65/+25)	PP_0151/PP_0152	hypothetical protein/hypothetical protein

ACATAGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAGGCGCTTTCCAGTCGGGCGCCGCGGATAGCGCC  >  NC_002947/160938‑161235                                                                                                                                                     |                                                                                                                                                      aCATAGTCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGa                                                                                                                                                      >  2:1103289/1‑150 (MQ=255)         ggTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGaa                                                                                                                                              <  1:1103289/150‑1 (MQ=255)               gACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAAc                                                                                                                                        <  1:1045710‑M2/150‑2 (MQ=255)                     gCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAAcgcacct                                                                                                                                  <  2:1138798‑M2/150‑8 (MQ=255)                                   tATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGgcgc                                                                                                                    <  1:920918/150‑1 (MQ=255)                                     tCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCAt                                                                                                                         >  1:623858/1‑143 (MQ=255)                                     tCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCAt                                                                                                                         <  2:623858/143‑1 (MQ=255)                                      ccATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTa                                                                                                                 >  1:77445/1‑150 (MQ=255)                                       catggcatggGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTAt                                                                                                                >  1:204558/1‑150 (MQ=255)                                        atgggattgGCGCTGGTCATGCCTGCGGGGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATc                                                                                                               >  2:54553/1‑150 (MQ=255)                                         tggcatggGCGCTGGCCATGCCTGCGGCGTCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGttggcttcggccctcgcacctgaggt                                                                                                                             >  2:156859‑M1/1‑109 (MQ=255)                                         tggcatggGCGCTGGCCATGCCTGCGGCGTCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGttggcttcggccctcgcacctgaggt                                                                                                                             <  1:156859‑M1/135‑27 (MQ=255)                                                     tGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGAGAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGAt                                                                                                  <  2:1045710/150‑1 (MQ=255)                                                       gCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATgg                                                                                                <  2:77445/150‑1 (MQ=255)                                                        ccATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTa                                                                                                                 >  2:719729/1‑132 (MQ=255)                                                        ccATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTa                                                                                                                 <  1:719729/132‑1 (MQ=255)                                                        ccATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGc                                                                                               <  1:144668/150‑1 (MQ=255)                                                               tGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGc                                                                                         >  2:900232/1‑149 (MQ=255)                                                               tGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGc                                                                                         <  1:900232/149‑1 (MQ=255)                                                                     ggcgAACAGCAATTGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATTGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCtgt                                                                                  <  1:81123/150‑1 (MQ=255)                                                                          aCAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATc                                                                             >  2:482115/1‑150 (MQ=255)                                                                            aGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATAGc                                                                           >  1:649409/1‑150 (MQ=255)                                                                             gCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCt                                                                          >  2:702234/1‑150 (MQ=255)                                                                              cAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTg                                                                         >  1:1102233/1‑150 (MQ=255)                                                                                     aaCAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCa                                                                  >  1:355564/1‑150 (MQ=255)                                                                                                 aTGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGt                                                      >  2:399283/1‑150 (MQ=255)                                                                                                   gAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCTGGCATGTTc                                                    <  2:649409/150‑1 (MQ=255)                                                                                                     gCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGttggcttcggccctcgcac                                                                                                                                    <  2:908338‑M1/68‑20 (MQ=255)                                                                                                     gCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGttggcttcggccctcgcac                                                                                                                                    >  1:908338‑M1/1‑49 (MQ=255)                                                                                                     gCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGa                                                  >  1:1136849/1‑150 (MQ=255)                                                                                                      cTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGaa                                                 <  2:204558/150‑1 (MQ=255)                                                                                                          cTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCAGGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGa                                             <  2:328277/150‑1 (MQ=255)                                                                                                           ttGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGttggcttcggccctcgcac                                                                                                                                    <  1:562848‑M1/62‑20 (MQ=255)                                                                                                           ttGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGttggcttcggccctcgcac                                                                                                                                    >  2:562848‑M1/1‑43 (MQ=255)                                                                                                           ttGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGAt                                            >  2:704002/1‑150 (MQ=255)                                                                                                           ttGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGAt                                            >  1:1421857/1‑150 (MQ=255)                                                                                                           ttGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGAt                                            >  1:298074/1‑150 (MQ=255)                                                                                                                 gCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGcac                                      >  1:535005/1‑150 (MQ=255)                                                                                                                     gAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAg                                  <  2:1102233/150‑1 (MQ=255)                                                                                                                         aaTGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAGgcgc                              <  1:399283/150‑1 (MQ=255)                                                                                                                            gAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAGGCGCttt                           <  1:482115/150‑1 (MQ=255)                                                                                                                             aaCGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCCGTTTCCAACGGATGTGCACAAAGGCGCTTTc                          <  1:1106974/150‑1 (MQ=255)                                                                                                                              aCGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGGGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAGGCGCTTTcc                         >  1:174924/1‑150 (MQ=255)                                                                                                                              aCGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAg                                  <  1:1034734/141‑1 (MQ=255)                                                                                                                              aCGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAg                                  >  2:1034734/1‑141 (MQ=255)                                                                                                                                 gCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGCGCCACGGACGCCTCGGCCAGCTCTGCATCGGGAGCTGGTAGGGCCGGCATGTTCGAACGGATGTGCACAAAGGCGCTTTCCAGt                      >  2:871161/1‑150 (MQ=255)                                                                                                                                     aGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAGGCGCTTTCCAGTCggg                  >  1:888527/1‑150 (MQ=255)                                                                                                                                          aCCTCAGGTGCGAGGGCCGAAGCCAAcgcacctgaggtaggcttcgccgttcatttttccagccttcaagaaagctcatgcgttatctgttgccattgctgttcgacgccgcaggcatggccagcgcccatgcca                            >  2:156859‑M2/1‑26 (MQ=255)                                                                                                                                          aCCTCAGGTGCGAGGGCCGAAGCCAAcgcacctgaggtaggcttcgccgttcatttttccagccttcaagaaagctcatgcgttatctgttgccattgctgttcgacgccgcaggcatggccagcgcccatgcca                            <  1:156859‑M2/135‑110 (MQ=255)                                                                                                                                          aCCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAGGCGCTTTCCAGTCGGGcgccg             <  1:702234/150‑1 (MQ=255)                                                                                                                                              cAGGGGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAGGCGCTTTCCAGTCGGGCGCCGCGGa         <  2:1369770/150‑1 (MQ=255)                                                                                                                                               aGGTGCGttggcttcggccctcgcacctgaggtaggcttcgccgttcatttttccagccttcaagaaagctcatgcgttatctgttgccattgctgttcgccgccgcaggcatggccagcgcccatgccatggataccaccacacaaagc        <  2:1138798‑M1/150‑144 (MQ=255)                                                                                                                                                 gTGCGAGGGCCGAAGCCAAcgcacctgaggtaggcttcgccgttcatttttccagccttcaagaaagc                                                                                        <  2:908338‑M2/68‑50 (MQ=255)                                                                                                                                                 gTGCGAGGGCCGAAGCCAAcgcacctgaggtaggcttcgccgttcatttttccagccttcaagaaagc                                                                                        >  1:908338‑M2/1‑19 (MQ=255)                                                                                                                                                 gTGCGAGGGCCGAAGCCAAcgcacctgaggtaggcttcgccgttcatttttccagccttcaa                                                                                              >  2:562848‑M2/1‑19 (MQ=255)                                                                                                                                                 gTGCGAGGGCCGAAGCCAAcgcacctgaggtaggcttcgccgttcatttttccagccttcaa                                                                                              <  1:562848‑M2/62‑44 (MQ=255)                                                                                                                                                     gttggcttcggccctcgcacctgaggtaggcttcgccgttcatttttccagccttcaagaaagctcatgcgttatctgttgccattgctgttcgccgccgcaggcatggccagcgcccatgccatggataccaccacacaaagcctggtc  <  1:1045710‑M1/150‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                      ACATAGCCGGTGATGACCAGGCTTTGTGTGGTGGTATCCATGGCATGGGCGCTGGCCATGCCTGCGGCGGCGAACAGCAATGGCAACAGATAACGCATGAGCTTTCTTGAAGGCTGGAAAAATGAACGGCGAAGCCTACCTCAGGTGCGAGGGCCGAAGCCAACGCACCTGTTGTGCATGGCGCGTATCAGAGTGCCAGGATGGCCTGGGCCAGCTGTGCATCGCTGGCTTGCAGGGCCGGCATGTTCGAACGGATGTGCACAAAGGCGCTTTCCAGTCGGGCGCCGCGGATAGCGCC  >  NC_002947/160938‑161235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.