| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 264723 | 42 (0.800) | 4 (0.080) | 4/232 | NT | 10.1% | intergenic (+31/‑47) | gabD‑I/PP_mr03 | succinate‑semialdehyde dehydrogenase/gabT regulatory region |
| ? | NC_002947 | = 264742 | 32 (0.650) | intergenic (+50/‑28) | gabD‑I/PP_mr03 | succinate‑semialdehyde dehydrogenase/gabT regulatory region | |||||
GTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/264601‑264723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACCG < NC_002947/264742‑264599 GTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCA > 2:895221/1‑150GTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGC < 1:306773/118‑1GTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTAACTATGC > 2:306773/1‑118 GTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAG < 1:895221/150‑1 GACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAA < 1:66776/105‑1 GACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAA > 2:66776/1‑105 CCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACCG > 2:3835/1‑150 GTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/264601‑264723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACCG < NC_002947/264742‑264599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |