| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 400649 | NA (NA) | 4 (0.080) | 4/236 | NT | 100% | coding (232/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | = 400667 | 0 (0.000) | coding (250/1059 nt) | PP_0334 | transposase | |||||
ACGAAGATCGCATCAAATCCCGCCAAGCGTTCCACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/400503‑400649‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCGACACGTTGCGCCGGCAGGATGCGAACCGGATTACCTTTGGCCTGCAGCAGCCTGGCCCAGGCTTGCGCACCTGGACCGCACTCCATCAAGACGGCCACGGTCGTTGGCAGCCTGAGCAGGAAATCGTGGAACGCTTGGCGGGATTTGA < NC_002947/400667‑400515 ACGAAGATCGCATCAAATCCCGCCAAGCGTTCCACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGG > 1:232775/1‑150ACGAAGATCGCATCAAATCCCGCCAAGCGTTCCACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGG > 1:622693/1‑150 GATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCC > 1:1088592/1‑113 GATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCC < 2:1088592/113‑1 AAAGGTAATCCGGTTCGCATCCTGCCGGCGACACGTTGCGCCGG > 1:739827/1‑44 AAAGGTAATCCGGTTCGCATCCTGCCGGCGACACGTTGCGCCGG < 2:739827/44‑1 CATCCTGCCGGCGCAACGTGTCGCCGGCAGGATGCGAACCGGATTACCTTTGGCCTGCAGCAGCCTGGCCCAGGCTTGCGCACCTGGACCGCACTCCATC < 1:1275098/100‑1 CATCCTGCCGGCGCAACGTGTCGCCGGCAGGATGCGAACCGGATTACCTTTGGCCTGCAGCAGCCTGGCCCAGGCTTGCGCACCTGGACCGCACTCCATC > 2:1275098/1‑100 CGACACGTTGCGCCGGCAGGATGCGAACCGGATTACCTTTGGCCTGCAGCAGCCTGGCCCAGGCTTGCGCACCTGGACCGCACTCCATCAAGACGGCCACGGTCGTTGGCAGCCTGAGCAGGAAATCGTGGAACGCTTGGCGGGATTTGA < 2:1253694/150‑1 GACACGTTGCGCCGGCAGGATGCGAACCGGATTACCTTTGGCCTGCAGCAGCCTGGCCCAGGCTTGCGCACCTGGACCGCACTCCATCAAGACGGCCACGGTCGTTGGCAGCCTGAGCAGGAAATCGTGGAACGCTTGGCGGGATTTGA < 1:1289515/149‑1 GACACGTTGCGCCGGCAGGATGCGAACCGGATTACCTTTGGCCTGCAGCAGCCTGGCCCAGGCTTGCGCACCTGGACCGCACTCCATCAAGACGGCCACGGTCGTTGGCAGCCTGAGCAGGAAATCGTGGAACGCTTGGCGGGATTTGA > 2:1289515/1‑149 GACACGTTGCGCCGGCAGGATGCGAACCGGATTACCTTTGGCCTGCAGCAGCCTGGCCCAGGCTTGCGCACCTGGACCGCACTCCATCAAGACGGCCACGGTCGTTGGCAGCCTGAGCAGGAAATCGTG > 1:245124/1‑129 GACACGTTGCGCCGGCAGGATGCGAACCGGATTACCTTTGGCCTGCAGCAGCCTGGCCCAGGCTTGCGCACCTGGACCGCACTCCATCAAGACGGCCACGGTCGTTGGCAGCCTGAGCAGGAAATCGTG < 2:245124/129‑1 ACGAAGATCGCATCAAATCCCGCCAAGCGTTCCACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/400503‑400649‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCGACACGTTGCGCCGGCAGGATGCGAACCGGATTACCTTTGGCCTGCAGCAGCCTGGCCCAGGCTTGCGCACCTGGACCGCACTCCATCAAGACGGCCACGGTCGTTGGCAGCCTGAGCAGGAAATCGTGGAACGCTTGGCGGGATTTGA < NC_002947/400667‑400515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |