New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 400649	NA (NA)	4 (0.080)	4/236	NT	100%	coding (232/1059 nt)	PP_0334	transposase
	?	NC_002947	= 400667	0 (0.000)					coding (250/1059 nt)	PP_0334	transposase

GATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTCGCCGAACATCGCAGCGGTGCAAAGAACGATCGTAACGACTGCTATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCA  >  NC_002947/400576‑400814                                                                                            |                                                                                                                                                    gATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGACACGTTGCGCCGgcaggatg                                                                                                                                             <  1:1275098‑M2/100‑9 (MQ=255) gATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGACACGTTGCGCCGgcaggatg                                                                                                                                             >  2:1275098‑M2/1‑92 (MQ=255)                                                                          ccGGCGCAACGTGTCGCCGgcaggatgcgaaccggattaccttt                                                                                                                            >  1:739827‑M2/1‑19 (MQ=255)                                                                          ccGGCGCAACGTGTCGCCGgcaggatgcgaaccggattaccttt                                                                                                                            <  2:739827‑M2/44‑26 (MQ=255)                                                                                          ccGgcaggatgcgaaccggattacctttggcctgcagcagcctggcccaggcttgcgcacctggaccgcactccatcaagacggccacggtcgttggcagcctgagcaggaaatcgtggaacgcttggcgggatttgatgcgatcttcgt  >  1:232775‑M2/1‑3 (MQ=255)                                                                                          ccGgcaggatgcgaaccggattacctttggcctgcagcagcctggcccaggcttgcgcacctggaccgcactccatcaagacggccacggtcgttggcagcctgagcaggaaatcgtggaacgcttggcgggatttgatgcgatcttcgt  >  1:622693‑M2/1‑3 (MQ=255)                                                                                            ggcaggatgcgaaccggattacctttggcctgcagcagcctggcccaggcttgcgcacctggaccgcactccatcaagacggccacggtcgttggcagcctgagcaggaaatc                                     >  1:1088592‑M2/1‑1 (MQ=255)                                                                                            ggcaggatgcgaaccggattacctttggcctgcagcagcctggcccaggcttgcgcacctggaccgcactccatcaagacggccacggtcgttggcagcctgagcaggaaatc                                     <  2:1088592‑M2/113‑113 (MQ=255)                                                                                            |                                                                                                                                                    GATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTCGCCGAACATCGCAGCGGTGCAAAGAACGATCGTAACGACTGCTATGCCATTTTGCGTGCCGGTCGCGATACGAGCATCGCTTCGATACCGATCAAGAGCACCACAGCACTGGCTATTCAAGCGCTGCACCGTATCCGGCGCGGTAACATCA  >  NC_002947/400576‑400814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.