New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 400649	NA (NA)	4 (0.080)	4/236	NT	100%	coding (232/1059 nt)	PP_0334	transposase
	?	NC_002947	= 400667	0 (0.000)					coding (250/1059 nt)	PP_0334	transposase

TCAAATCCCGCCAAGCGTTCCACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTCGCCGAACATCGCAGCGGTGCAAAGAACGA  >  NC_002947/400515‑400692                                                                                                                                       |                                            tCAAATCCCGCCAAGCGTTCCACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTCG                              <  2:1253694‑M2/150‑1 (MQ=255) tCAAATCCCGCCAAGCGTTCCACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTC                               <  1:1289515‑M2/149‑1 (MQ=255) tCAAATCCCGCCAAGCGTTCCACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTC                               >  2:1289515‑M2/1‑149 (MQ=255)                     cACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTC                               >  1:245124‑M2/1‑129 (MQ=255)                     cACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTC                               <  2:245124‑M2/129‑1 (MQ=255)                                                              gATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGACACGTTGCGCCGgcaggatg                   <  1:1275098‑M2/100‑9 (MQ=255)                                                              gATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGACACGTTGCGCCGgcaggatg                   >  2:1275098‑M2/1‑92 (MQ=255)                                                                                                                                       ccGGCGCAACGTGTCGCCGgcaggatgcgaaccggattaccttt  >  1:739827‑M2/1‑19 (MQ=255)                                                                                                                                       ccGGCGCAACGTGTCGCCGgcaggatgcgaaccggattaccttt  <  2:739827‑M2/44‑26 (MQ=255)                                                                                                                                       |                                            TCAAATCCCGCCAAGCGTTCCACGATTTCCTGCTCAGGCTGCCAACGACCGTGGCCGTCTTGATGGAGTGCGGTCCAGGTGCGCAAGCCTGGGCCAGGCTGCTGCAGGCCAAAGGTAATCCGGTTCGCATCCTGCCGGCGCAACGTGTCGCCGAACATCGCAGCGGTGCAAAGAACGA  >  NC_002947/400515‑400692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.