| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 535046 | 43 (0.820) | 9 (0.190) | 5/226 | NT | 18.3% | intergenic (+28/‑92) | nusG/rplK | transcription antipausing factor NusG/50S ribosomal protein L11 |
| ? | NC_002947 | = 535053 | 41 (0.850) | intergenic (+35/‑85) | nusG/rplK | transcription antipausing factor NusG/50S ribosomal protein L11 | |||||
GTCCGTTCGCTGACTTCAATGGTAGTGTCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/534888‑535046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accccgcagcACACAGGGCTGCGGGGTATGGGATGCTTCGTCCGCCTAGACCTTTTCGACCTGGCTGAACTCGAGCTCCACCGGAGTAGAGCGACCGAAAATGAGCACCGCAACCTGCAGGCGACTCTTTTCGTAGTTAACTTCTTCGACACTA < NC_002947/535053‑534910 GTCCGTTCGCTGACTTCAATGGTAGTGTCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATA > 2:803227/1‑150 GTTCGCTGACTTCAATGGTAGTGTCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCC > 2:1232494/1‑150 TCGCTGACTTCAATGGTAGTGTCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGACAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGC < 2:1033043/150‑1 GTGTCGAAGAAGTTAACTACGAAAAGAGTCGCCTGGCGCTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTCCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGG < 1:784766/150‑1 CTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGG > 1:795288/1‑73 CTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGG < 2:795288/73‑1 GAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGtgt > 1:847292/1‑69 GAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGTGT < 2:847292/72‑1 CAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGG > 1:346957/1‑65 CAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGG < 2:346957/65‑1 GCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGG < 1:576680/63‑1 GCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGG > 2:576680/1‑63 CGCAGCACACAGGGCTGCGGGGTATGGGATGCTTCGTCCGCCTAGACCTTTTCGACCTGGCTGAACTCGAGCTCCACCGGAGTAGAGCGACCGAAAATGAGCACCGCAACCTGCAGGCGACTCTTTTCGTAGTTAACTTCTTCGACACTA > 2:1036776/1‑150 GTCCGTTCGCTGACTTCAATGGTAGTGTCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/534888‑535046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accccgcagcACACAGGGCTGCGGGGTATGGGATGCTTCGTCCGCCTAGACCTTTTCGACCTGGCTGAACTCGAGCTCCACCGGAGTAGAGCGACCGAAAATGAGCACCGCAACCTGCAGGCGACTCTTTTCGTAGTTAACTTCTTCGACACTA < NC_002947/535053‑534910 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |