New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	861555 =	46 (0.880)	3 (0.060)	3/238	NT	6.3%	coding (210/987 nt)	PP_0742	hypothetical protein
	?	NC_002947	861590 =	45 (0.890)					coding (175/987 nt)	PP_0742	hypothetical protein

TTGCAGAAGGCCGGGCAATCCGTGCACTTGTTCGACAAAGGCCACGGCAGTGGCGGGCGCATGGCCAGCAAGCGCAGCGAAGCCGGCGCGCTCGACCTGGGCGCACAGTACTTCACTGCCCGTGACCGACGCTTCGTCGATCAGGTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/861704‑861555 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGG  >  NC_002947/861590‑861736                                                                                                                                                                                                                                                                                                           TTGAAGAAGGCCGGGCAATCCGTGCACTTGTTCGACAAAAGCCACGGCAGTGGCGGGCGCATGTCCAGCAAGCGCAGCGAAGCCGGCGCGCTCGACCTGGGCGCACAGTACTTCACTGCCCGTGACCGACGCTTCGTCGATCAGGTGCAG                                                                                                                                                     <  2:515783/150‑1   GCAGAAGGCCGGGCAATCCGTGCACTTGTTCGACAAAGGCCACGGCAGTGGCGGGCGCATGGCCAGCAAGCGCAGCGAAGCCGGCGCGCTCGACCTGGGCGCACAGTACTTCACTGCCCGTGACCGACGCTTCGTCGATCAGGTGCAG                                                                                                                                                     >  1:1370670/1‑148   GCAGAAGGCCGGGCAATCCGTGCACTTGTTCGACAAAGGCCACGGCAGTGGCGGGCGCATGGCCAGCAAGCGCAGCGAAGCCGGCGCGCTCGACCTGGGCGCACAGTACTTCACTGCCCGTGACCGACGCTTCGTCGATCAGGTGCAG                                                                                                                                                     <  2:1370670/148‑1                                                                                                                TTCACTGCCCGTGACCGACGCTTCGTCGATCAGGTGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCT                                      >  2:410890/1‑150                                                                                                                     TGCCCGTGACCGACGCTTCGTCGATCAGGTGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGC                                                                                                     <  1:1296583/82‑1                                                                                                                     TGCCCGTGACCGACGCTTCGTCGATCAGGTGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGC                                                                                                     >  2:1296583/1‑82                                                                                                                                                   GCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGG                          >  1:1262849/1‑127                                                                                                                                                   GCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGG                          <  2:1262849/127‑1                                                                                                                                                    CAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGG  >  1:1399527/1‑150                                                                                                                                                                                                                                                                                                           TTGCAGAAGGCCGGGCAATCCGTGCACTTGTTCGACAAAGGCCACGGCAGTGGCGGGCGCATGGCCAGCAAGCGCAGCGAAGCCGGCGCGCTCGACCTGGGCGCACAGTACTTCACTGCCCGTGACCGACGCTTCGTCGATCAGGTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/861704‑861555 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGG  >  NC_002947/861590‑861736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.