New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	861555 =	46 (0.880)	3 (0.060)	3/238	NT	6.3%	coding (210/987 nt)	PP_0742	hypothetical protein
	?	NC_002947	861590 =	45 (0.890)					coding (175/987 nt)	PP_0742	hypothetical protein

TGGCACGCCCACCCAGCGCGTCTGCTCGTCGGGGGAGGGTGTAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGG  >  NC_002947/861444‑861736                                                                                                                                                   |                                                                                                                                                   agaaggccgggcaatccgtgcacttgttcgacaaaggccacggcagtggcgggcgcatggccagcaagcgcagcgaagccggcgcgctcgacctgggcgcacagtacttcaCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGaa                                                                                                                                                 >  2:410890‑M1/112‑150 (MQ=255)     aCGCCCAGCCAGCGAGTCTGCTCGTCGGGGGAGGGCGTAAGTTCTCCATCCCGGTAGATGTACAGTTGCGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGAGAAGAGCAGTGAAGTAc                                                                                                                                             >  2:117639/1‑150 (MQ=255)           acccaGCGCGTCTGCTCGTCGGGGGAGGGTGTAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTgcg                                                                                                                                       >  1:1099352/1‑150 (MQ=255)                     tCTGCTCGTCGGGGGAGGGTGTAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGa                                                                                                                             <  1:601071/150‑1 (MQ=255)                     tCTGCTCGTCGGGGGAGGGTGTAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGa                                                                                                                             >  1:161912/1‑150 (MQ=255)                       tGCTCGTCGGGGGAGGGTGTAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAgc                                                                                                                           <  1:1324158/150‑1 (MQ=255)                        gCTCGTCGGGGGAGGGTGTAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAgcg                                                                                                                          >  2:30643/1‑150 (MQ=255)                            gtcgGGGGAGGGTGTAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGcc                                                                                                                      >  1:207265/1‑150 (MQ=255)                                     gggTGTAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTAGCt                                                                                                             <  1:432056/150‑1 (MQ=255)                                        tgtAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCATGTCGAGCGCGCCGGCTTCGCTgcg                                                                                                          <  1:117639/150‑1 (MQ=255)                                         gtAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCAAGCCGGCGGCCACCTATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTgcgc                                                                                                         >  1:516371/1‑150 (MQ=255)                                            aGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTg                                                                                                      >  2:987556/1‑150 (MQ=255)                                                    aTCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACtgt                                                                                                                                          <  1:1102361/106‑1 (MQ=255)                                                    aTCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACtgt                                                                                                                                          >  2:1102361/1‑106 (MQ=255)                                                         ggTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGGCGGGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGcgcc                                                                                         <  2:884463/150‑1 (MQ=255)                                                              ttGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCa                                                                                    >  1:929837/1‑150 (MQ=255)                                                                gTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACt                                                                                  >  1:852453/1‑150 (MQ=255)                                                                gTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGAAGACGCGTCGGTCACGGGCAGTGAAGGACTGTGCGCCCAGGTCTGTCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACt                                                                                  >  2:871404/1‑150 (MQ=255)                                                                 tACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCtt                                                                                                       >  2:197510/1‑128 (MQ=255)                                                                 tACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCtt                                                                                                       <  1:197510/128‑1 (MQ=255)                                                                      ttGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTg                                                                            >  2:423576/1‑150 (MQ=255)                                                                       tGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTgg                                                                           <  2:1099352/150‑1 (MQ=255)                                                                           gTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTTTAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCtt                                                                       >  1:320183/1‑150 (MQ=255)                                                                                cACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCg                                                                  >  1:649935/1‑150 (MQ=255)                                                                                cACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCg                                                                  >  2:1275584/1‑150 (MQ=255)                                                                                 aCTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGa                                                                 >  2:973652/1‑150 (MQ=255)                                                                                   tGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAAc                                                               <  1:423576/150‑1 (MQ=255)                                                                                      tCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAg                                                            >  1:1127920/1‑150 (MQ=255)                                                                                           ccAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTTCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGTCCTTTGTCGAACAAGTGCAc                                                       >  1:1148652/1‑150 (MQ=255)                                                                                            cAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAGGTGCACg                                                      >  1:736625/1‑150 (MQ=255)                                                                                            cAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACg                                                      >  1:102577/1‑150 (MQ=255)                                                                                               ccGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGAt                                                   <  2:852453/150‑1 (MQ=255)                                                                                                  gcggcCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGc                                                <  1:987556/150‑1 (MQ=255)                                                                                                       caaccATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGc                                           >  2:1064422/4‑150 (MQ=255)                                                                                                       cACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGc                                           <  2:207265/150‑1 (MQ=255)                                                                                                        aCCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGcc                                          <  2:1127920/150‑1 (MQ=255)                                                                                                            ttcactgcccgtgaccgacgcttcgtcgatcaggtgcagTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCt                                      >  2:410890‑M2/40‑150 (MQ=255)                                                                                                            aTTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCt                                      <  1:973652/150‑1 (MQ=255)                                                                                                            aTTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCt                                      >  2:1026596/1‑150 (MQ=255)                                                                                                                CTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGc                                    >  1:1370670‑M1/1‑148 (MQ=255)                                                                                                                CTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGc                                    <  2:1370670‑M1/148‑1 (MQ=255)                                                                                                                CTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGACATGCGCCCGCCACTGCCGTGGCTTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTTCaa                                  <  2:515783‑M1/150‑1 (MQ=255)                                                                                                                 tgcccgtgaccgacgcttcgtcgatcaggtgcagTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGc                                                                                                     >  2:1296583‑M2/35‑82 (MQ=255)                                                                                                                 tgcccgtgaccgacgcttcgtcgatcaggtgcagTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGc                                                                                                     <  1:1296583‑M2/48‑1 (MQ=255)                                                                                                                         aTCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGggc                         <  2:736625/150‑1 (MQ=255)                                                                                                                           cgacgaAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGggcgg                       <  1:1275584/150‑1 (MQ=255)                                                                                                                            gacgaAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGggcggc                      >  2:597354/1‑150 (MQ=255)                                                                                                                             acgaAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCt                     <  1:30643/150‑1 (MQ=255)                                                                                                                               gaAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGt                                                                             <  2:1268315/92‑1 (MQ=255)                                                                                                                               gaAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGt                                                                             >  1:1268315/1‑92 (MQ=255)                                                                                                                                     tCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCaa                                  >  2:396150/1‑129 (MQ=255)                                                                                                                                     tCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCaa                                  <  1:396150/129‑1 (MQ=255)                                                                                                                                             gggCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGc     <  1:597354/150‑1 (MQ=255)                                                                                                                                               gcagTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTggg                          >  1:1262849‑M2/5‑127 (MQ=255)                                                                                                                                               gcagTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTggg                          <  2:1262849‑M2/123‑1 (MQ=255)                                                                                                                                                cagTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCgg  >  1:1399527‑M2/4‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                   TGGCACGCCCACCCAGCGCGTCTGCTCGTCGGGGGAGGGTGTAAGTTCGCCATCACGGTAGTTGTACAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCGTGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGG  >  NC_002947/861444‑861736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.