| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 884638 = | 85 (1.620) | 5 (0.100) | 5/240 | NT | 5.8% | coding (546/2718 nt) | PP_0767 | LuxR family transcriptional regulator |
| ? | NC_002947 | 884681 = | 79 (1.540) | coding (589/2718 nt) | PP_0767 | LuxR family transcriptional regulator | |||||
TCCAGTGCCTGGCCGCGCAGGCCGGTAGGCTGGCGACCGATCACTGCCAACGACTCATCCGCGGTGAGGCGCAGGTCCTGTTCGTTAAGCTCGACCAACTGCCGGGACAGGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCT‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/884787‑884638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ct‑gTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTGGGTG > NC_002947/884681‑884818 TCCAGTGCCTGGCCGCGCAGGCCGGTAGGCTGGCGACCGATCACTGCCAACGACTCATCCGCGGTGAGGCGCAGGTCCTGTTCGTTAAGCTCGACCAACTGCCGGGACAGGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCT‑G > 1:742337/1‑150TCCAGTGCCTGGCCGCGCAGGCCGGTAGGCTGGCGACCGATCACTGCCAACGACTCATCCGCGGTGAGGCGCAGGTCCTGTTCGTTAAGCTCGACCAACTGCCGGGACAGGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCT‑G < 1:941670/150‑1TCCAGTGCCTGGCCGCGCAGGCCGGTAGGCTGGCGACCGATCACTGCCAACGACTCATCCGCGGTGAGGCGCAGGTCCGGTTCGTTAAGCTCGACCAACTGCCGGGACAGGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCT‑G > 1:455123/1‑150 GCCGCGCAGGCCGGTAGGCTGGCGACCGATCACTGCCAACGACTCATCCGCGGTGAGGCGCAGGTCCTGTTCGTTAAGCTCGACCAACTGCCGGGACAGGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCT‑G > 1:985116/1‑139 GCCGCGCAGGCCGGTAGGCTGGCGACCGATCACTGCCAACGACTCATCCGCGGTGAGGCGCAGGTCCTGTTCGTTAAGCTCGACCAACTGCCGGGACAGGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCT‑G < 2:985116/139‑1 GACCAACTGCCGGGACAGGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCTGGTCACCAGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTG > 2:1345119/1‑150 CAGGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCTGGTCACCAGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTG < 1:1345119/150‑1 GGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCT‑GTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACA > 2:367645/1‑150 GCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCT‑GTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAA > 1:546127/1‑150 CGCTGGCGGCT‑GTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTGGGTG < 1:367645/150‑1 TCCAGTGCCTGGCCGCGCAGGCCGGTAGGCTGGCGACCGATCACTGCCAACGACTCATCCGCGGTGAGGCGCAGGTCCTGTTCGTTAAGCTCGACCAACTGCCGGGACAGGCGCAGGCGCGCCAGGTGCCAGCCTGGCCGCTGGCGGCT‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/884787‑884638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ct‑gTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTGGGTG > NC_002947/884681‑884818 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |