New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	884638 =	85 (1.620)	5 (0.100)	5/240	NT	5.8%	coding (546/2718 nt)	PP_0767	LuxR family transcriptional regulator
	?	NC_002947	884681 =	79 (1.540)					coding (589/2718 nt)	PP_0767	LuxR family transcriptional regulator

TACTGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTGGGTGGCCGGGT  >  NC_002947/884541‑884825                                                                                                                                              |                                                                                                                                                  tACTGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGt                                                                                                                                         >  1:782227/1‑150 (MQ=255) tACTGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGt                                                                                                                                         >  2:1245351/1‑150 (MQ=255)   cTGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTg                                                                                                                                       >  1:918356/1‑150 (MQ=255)    tGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTc‑cc                                                                                                                                               >  2:735991/1‑141 (MQ=255)    tGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTc‑cc                                                                                                                                               <  1:735991/141‑1 (MQ=255)    tGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCgg                                                                                                                                             >  2:683442/1‑143 (MQ=255)    tGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCgg                                                                                                                                             <  1:683442/143‑1 (MQ=255)    tGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTgg                                                                                                                                      <  1:184094/150‑1 (MQ=255)       caggccggtaggctggcgaccgatcactgccaacgactcatccgcggtgaggcgcaggtcctgttcgttaagctcgaccaactgctggtgaCCAGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTc                                                                                                                                    >  2:1345119‑M1/92‑150 (MQ=255)           cTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCt                                                                                                                               >  1:613599/1‑150 (MQ=255)           cTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCt                                                                                                                               >  1:307484/1‑150 (MQ=255)            tATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTc‑c                                                                                                                                                >  1:696084/1‑132 (MQ=255)            tATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTc‑c                                                                                                                                                <  2:696084/132‑1 (MQ=255)            tATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCtt                                                                                                                              >  1:61828/1‑150 (MQ=255)              tCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTaa                                                                                                                            <  1:506258/150‑1 (MQ=255)                 ccTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCAGCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGa                                                                                                                         >  2:1027124/1‑150 (MQ=255)                 ccTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTg                                                                                                                                       <  1:223718/136‑1 (MQ=255)                 ccTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTg                                                                                                                                       >  2:223718/1‑136 (MQ=255)                 ccTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGa                                                                                                                         >  1:1412797/1‑150 (MQ=255)                   tGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAAc                                                                                                                       <  2:686236/150‑1 (MQ=255)                       ccAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGa                                                                                                                   >  2:1116802/1‑150 (MQ=255)                           gggCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTg                                                                                                               >  1:914536/1‑150 (MQ=255)                            ggCCGGTGCTCGCCCGTTGCCTGCAGTTGTTCCTCAATCGGCTGCCCCGCGGCCTGGTGGTGCGGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTgc                                                                                                              <  2:447130/150‑1 (MQ=255)                             gCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCCCCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGa                                                                                                                   <  2:519135/144‑1 (MQ=255)                             gCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGa                                                                                                                   >  1:519135/1‑144 (MQ=255)                                 gTGCTCGACCGTTGCCTGCAGTTCTTCCTAAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGAc                                                                                                                  >  1:80434/1‑141 (MQ=255)                                 gTGCTCGACCGTTGCCTGCAGTTCTTCCTAAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGAc                                                                                                                  <  2:80434/141‑1 (MQ=255)                                     tCGACCTTTTCCTGTAGTTCTTACTCAATGACCTG‑CCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACcgc                                                                                                    >  2:1124104/1‑150 (MQ=255)                                     tCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCTCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGTAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACcg                                                                                                     >  1:574847/1‑150 (MQ=255)                                     tCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCAGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACcg                                                                                                     >  2:103292/1‑150 (MQ=255)                                       gACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACcgcg                                                                                                   >  2:363568/1‑150 (MQ=255)                                         ccGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGGGCTTAACGAACAGGACCTGCGCCTCACCGCCGa                                                                                                 <  2:219478/150‑1 (MQ=255)                                          cGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCCCCGCGGAt                                                                                                >  1:538983/1‑150 (MQ=255)                                            ttGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGa                                                                                              <  2:914536/150‑1 (MQ=255)                                            ttGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGAGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGa                                                                                              <  2:696949/150‑1 (MQ=255)                                               ccTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTaa                                                                                                                            <  1:552703/117‑1 (MQ=255)                                               ccTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTaa                                                                                                                            >  2:552703/1‑117 (MQ=255)                                                cTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCg                                                                                          >  1:91325/1‑150 (MQ=255)                                                 tGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGt                                                                                         >  2:957685/1‑150 (MQ=255)                                                  gCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGtt                                                                                        <  1:1116802/150‑1 (MQ=255)                                                   cAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGAGATTCGC‑CCGGTATTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTg                                                                                       <  2:550551/150‑1 (MQ=255)                                                    aGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTgg                                                                                      >  2:237096/1‑150 (MQ=255)                                                    aGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTgg                                                                                      >  2:237094/1‑150 (MQ=255)                                                    aGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTgg                                                                                      <  1:363568/150‑1 (MQ=255)                                                     gTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGNTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGGGGGTTTC‑GCCGCGGTTGGGCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGc                                                                                     >  1:1237111/1‑150 (MQ=255)                                                        cttcCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGt                                                                                  >  1:204968/1‑150 (MQ=255)                                                            cTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGtt                                                                                                                                        >  1:186002/1‑92 (MQ=255)                                                            cTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGtt                                                                                                                                        <  2:186002/92‑1 (MQ=255)                                                            cTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATc                                                                              >  1:688765/1‑150 (MQ=255)                                                            cTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATc                                                                              <  2:688765/150‑1 (MQ=255)                                                             tCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCg                                                                             >  2:699022/1‑150 (MQ=255)                                                               aaTCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGt                                                                           >  2:809546/1‑150 (MQ=255)                                                               aaTCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGt                                                                           >  2:1143149/1‑150 (MQ=255)                                                                          ccccGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTAc                                                                >  2:906653/1‑150 (MQ=255)                                                                          ccccGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTAc                                                                >  1:1219054/1‑150 (MQ=255)                                                                           cccGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGCTCGGTCGCCCGCCTccc                                                               >  2:657855/1‑150 (MQ=255)                                                                              ggCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAAGCACGCACCCGGCCCCCCTACTCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGAACCGCGCCTCACCGCGGATGAGTCGTACAAAGTGCTCTCTCCCCAGCCTATCgtc                                                            <  2:1378955/150‑3 (MQ=255)                                                                                  tGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCa                                                                                                                                           <  2:1373793/67‑1 (MQ=255)                                                                                  tGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCa                                                                                                                                           >  1:1373793/1‑67 (MQ=255)                                                                                   gaccaactgccgggacaggcgcaggcgcgccaggtgccagcctggccgctggcggctggTCACCAGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTg                                                         >  2:1345119‑M2/60‑150 (MQ=255)                                                                                    gtgtTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACa                                                                                                                      >  2:196397/1‑86 (MQ=255)                                                                                    gtgtTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACa                                                                                                                      <  1:196397/86‑1 (MQ=255)                                                                                      gtTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCgg                                                    >  2:441450/1‑150 (MQ=255)                                                                                         gCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCa                                                 <  2:61828/150‑1 (MQ=255)                                                                                           tGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGTAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAgg                                               <  2:574847/150‑1 (MQ=255)                                                                                                  caggcgcaggcgcgccaggtgccagcctggccgctggcggctggTCACCAGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTg                                          <  1:1345119‑M2/106‑1 (MQ=255)                                                                                                  C‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACCGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGa                                        >  1:455123‑M1/1‑150 (MQ=255)                                                                                                  C‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGc                                                   <  2:985116‑M1/139‑1 (MQ=255)                                                                                                  C‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGc                                                   >  1:985116‑M1/1‑139 (MQ=255)                                                                                                  C‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGa                                        >  1:742337‑M1/1‑150 (MQ=255)                                                                                                  C‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGa                                        <  1:941670‑M1/150‑1 (MQ=255)                                                                                                     ggcgcaggcgcgccaggtgccagcctggccgctggcggctgTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACa                                      >  2:367645‑M2/42‑150 (MQ=255)                                                                                                      gcgcaggcgcgccaggtgccagcctggccgctggcggctgTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACaa                                     >  1:546127‑M2/41‑150 (MQ=255)                                                                                                        gccAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGTCCAGGCACTgg                                         <  2:420655/144‑1 (MQ=255)                                                                                                        gccAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTgg                                         >  1:420655/1‑144 (MQ=255)                                                                                                        gccAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAAcc                                   <  2:918356/150‑1 (MQ=255)                                                                                                               gCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCg                                                                             <  1:626904/101‑1 (MQ=255)                                                                                                               gCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCg                                                                             >  2:626904/1‑101 (MQ=255)                                                                                                                ccAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCcag                           <  2:204968/150‑1 (MQ=255)                                                                                                                 cAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCcagc                          >  2:738741/1‑150 (MQ=255)                                                                                                                 cAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCcagc                          <  1:237094/150‑1 (MQ=255)                                                                                                                 cAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCcagc                          <  1:237096/150‑1 (MQ=255)                                                                                                                      tGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGa                                                                                              >  2:18893/1‑77 (MQ=255)                                                                                                                      tGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGa                                                                                              <  1:18893/77‑1 (MQ=255)                                                                                                                          aCCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGc                                                                                                                                <  1:221246/39‑1 (MQ=255)                                                                                                                          aCCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGc                                                                                                                                >  2:221246/1‑39 (MQ=255)                                                                                                                          aCCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTgg                                                                                      <  1:292605/81‑1 (MQ=255)                                                                                                                          aCCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTgg                                                                                      >  2:292605/1‑81 (MQ=255)                                                                                                                          aCCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACg                 >  1:1329863/1‑150 (MQ=255)                                                                                                                          aCCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACg                 >  1:767095/1‑150 (MQ=255)                                                                                                                              ggCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTg             <  2:613599/150‑1 (MQ=255)                                                                                                                               gcgcgcCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTgg            <  1:441450/150‑1 (MQ=255)                                                                                                                                  cgctggcggctgTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTGGGTg         <  1:367645‑M2/138‑1 (MQ=255)                                                                                                                                     ctgcgcctgTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTGGGTGGcc      >  1:879847/1‑150 (MQ=255)                                                                                                                                         gcctgTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTGGGTGGCCGGGt  <  2:91325/150‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                  TACTGGACGACTATCACCTGGCCCAGGGGCCGGTGCTCGACCGTTGCCTGCAGTTCTTCCTCAATCACCTGCCCCCCGGCCTGGTGTTGCTGGTGACC‑AGCCGCCAGCGGCCAGGCTGGCACCTGGCGCGCCTGCGCCTGTC‑CCGGCAGTTGGTCGAGCTTAACGAACAGGACCTGCGCCTCACCGCGGATGAGTCGTTGGCAGTGATCGGTCGCCAGCCTACCGGCCTGCGCGGCCAGGCACTGGACAACCTGATCCAGCGCAGCGACGGCTGGGTGGCCGGGT  >  NC_002947/884541‑884825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.