| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1103269 = | 34 (0.650) | 6 (0.120) | 5/238 | NT | 14.5% | coding (23/1266 nt) | murA | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| ? | NC_002947 | 1103298 = | 38 (0.750) | coding (52/1266 nt) | murA | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase | |||||
GCCCGAACAGCTCGATCATGGTGGTGATGTCGTGCAGGTGCGGCAGGTTGCCCACGGTGACCGGGCCATCGGCCAGCAGGGTGGCTGCCAGAATCGGCAGGGCTGCGTTTTTCGCGCCCGAAATGCGGATCTCGCCGTCAAGGCGAGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1103421‑1103269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAGCTGTTCGGGCGCATGGGCATCGAGCCTGTGATCG > NC_002947/1103298‑1103445 GCCCGAACAGCTCGATCATGGTGGTGATGTCGTGCAGGTGCGGCAGGTTGCCCACGGTGACCGGGCCATCGGCCAGCAGGGTGGCTGCCAGAATCGGCAGGGCTGCGTTTTTCGCGCCCGAAATGCGGATCTCGCCGTCAAGGCGAGCGC > 1:715551/1‑150GCCCGAACAGCTCGATCATGGTGGTGATGTCGTGCAGGTGCGGCAGGTTGCCCACGGTGACCGGGCCATCGGCCAGCAGGGTGGCTGCCAGAATCGGCAGGGCTGCGTTTTTCGCGCCCGAAATGCGGATCTCGCCGTCAAGGCGAGCGC > 2:249749/1‑150 CTCGATCATGGTGGTGATGTCGTGCAGGTGCGGCAGGTTGCCCACGGTGACCGGGCCATCGGCCAGCAGGGTGGCTGCCAGAATCGGCAGGGCTGCGTTTTTCGCGCCCGAAATGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGG < 1:567354/150‑1 CGGATCTCGCCGTCAAGGCGAGCGCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAGCTGTTCGG < 2:567354/150‑1 GGATCTCGCCGTCAAGGCGAGCGCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATC > 1:647213/1‑138 GGATCTCGCCGTCAAGGCGAGCGCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATC < 2:647213/138‑1 GGATCTCGCCGTCAAGGCGAGCGCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGG > 1:584331/1‑100 GGATCTCGCCGTCAAGGCGAGCGCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGG < 2:584331/100‑1 GCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACTCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGAGTTCGCCTCCATGATCGAGCTGTTCGGGCGCATGGGCATCGAGCCTGTGATCG > 1:797989/1‑150 GCCCGAACAGCTCGATCATGGTGGTGATGTCGTGCAGGTGCGGCAGGTTGCCCACGGTGACCGGGCCATCGGCCAGCAGGGTGGCTGCCAGAATCGGCAGGGCTGCGTTTTTCGCGCCCGAAATGCGGATCTCGCCGTCAAGGCGAGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1103421‑1103269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAGCTGTTCGGGCGCATGGGCATCGAGCCTGTGATCG > NC_002947/1103298‑1103445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |