New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1103269 =	34 (0.650)	6 (0.120)	5/238	NT	14.5%	coding (23/1266 nt)	murA	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
	?	NC_002947	1103298 =	38 (0.750)					coding (52/1266 nt)	murA	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase

AGCAGGCGATCTATGCTCACCTGAATCCGTGGATCGCCAATGGCAGCATCCATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAGCTGT  >  NC_002947/1103120‑1103415                                                                                                                                                      |                                                                                                                                                   agcagGCGATCTATGCTCACCTGAATCCGTGGATCGCCAATGGCAGCATCCATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTgg                                                                                                                                                    <  1:597384/150‑1 (MQ=255)  cgatcacaggctcgatgcccatgcgcccgaacagctcgatcatggaggcgaactcgtgcaggtgcggcaggttgcccacggtgaccgggccatcggccagcagagtggctgccagaatcggcagggctgcgtttttcgcgcccgaaatgc                                                                                                                                                   >  1:797989‑M1/149‑150 (MQ=255)     ggCGATCTATGCTCACCTGAATCCGTGGATCGCCAATGGCAGCATCCATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTTATTATTACTggcggc                                                                                                                                                >  2:1161792/1‑150 (MQ=255)         aTCTATGCTCACCTGAATCCGTGGATCGCCAATGGCAGCATCCATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTc                                                                                                                                            >  1:679772/1‑150 (MQ=255)                     cTGAATCCGTGGATCGCCAATGGCAGCATCCATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCg                                                                                                                                >  1:1010953/1‑150 (MQ=255)                      tGAATCCGTGGATCGCCAATGGCAGCATCCATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCga                                                                                                                               <  1:885849/150‑1 (MQ=255)                            ccgaacagctcgatcatggtggtgatgtcgtgcaggtgcggcaggttgcccacggtgaccgggccatcggccagcagggtggctgccagaatcggcagggctgcgtttttcgcgcccgaaatGCGGCGCTCGCCTTGACGGCGAGATCCg                                                                                                                         <  2:567354‑M1/28‑1 (MQ=255)                                     ccAATGGCAGCATCCATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCggg                                                                                                                <  2:1036418/150‑1 (MQ=255)                                       gatcatggtggtgatgtcgtgcaggtgcggcaggttgcccacggtgaccgggccatcggccagcagggtggctgccagaatcggcagggctgcgtttttcgcgcccgaaatGCGGCGCTCGCCTTGACGGCGAGATcc                                                                                                                          >  1:647213‑M1/112‑138 (MQ=255)                                       gatcatggtggtgatgtcgtgcaggtgcggcaggttgcccacggtgaccgggccatcggccagcagggtggctgccagaatcggcagggctgcgtttttcgcgcccgaaatGCGGCGCTCGCCTTGACGGCGAGATcc                                                                                                                          <  2:647213‑M1/27‑1 (MQ=255)                                            cagcaTCCATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGaaa                                                                                                         >  1:469341/1‑150 (MQ=255)                                                  ccATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCa                                                                                                   >  2:715551/1‑150 (MQ=255)                                                    aTGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACATGGAGGAGAGACTAAAATGGTTACAACGAGTAATAGTTCCGTCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGTGCGAAAAACGCAGc                                                                                                 >  1:678441/1‑150 (MQ=255)                                                            aCCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCCAGACTCCAATGGACAAACTGATTATTACTGGCGGCGTTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGa                                                                                         <  1:1175116/150‑1 (MQ=255)                                                                tGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCt                                                                                     >  1:366021/1‑150 (MQ=255)                                                                ggaagggtttCGGCAGCGCAGCGGGGGCTGGGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCt                                                                                     <  2:617830/143‑1 (MQ=255)                                                                  aaaTTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTgg                                                                                   <  2:481356/150‑1 (MQ=255)                                                                    aTTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGcc                                                                                 >  2:699238/1‑149 (MQ=255)                                                                           agcagcGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCAccc                                                                          <  1:789401/150‑1 (MQ=255)                                                                             ccacggtgaccgggccatcggccagcagggtggctgccagaatcggcagggctgcgtttttcgcgcccgaaatGCGGCGCTCGCCTTGACGGCGAGATcc                                                                                                                          >  1:584331‑M1/74‑100 (MQ=255)                                                                             ccacggtgaccgggccatcggccagcagggtggctgccagaatcggcagggctgcgtttttcgcgcccgaaatGCGGCGCTCGCCTTGACGGCGAGATcc                                                                                                                          <  2:584331‑M1/27‑1 (MQ=255)                                                                                cgcagcCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCctgctg                                                                     <  2:679772/150‑1 (MQ=255)                                                                                      gggtgcggAGCGCACCTGCGCCAGCTTGGCGGCGAGACTCCAATGGACAAACTGATTGTTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGAt                                                               <  2:576777/143‑1 (MQ=255)                                                                                       tGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGTCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATg                                                              <  1:526636/150‑1 (MQ=255)                                                                                             gAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCa                                                                                 <  2:241755/125‑1 (MQ=255)                                                                                             gAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGACCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCa                                                                                 >  1:241755/1‑125 (MQ=255)                                                                                                cgcACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCa                                                     >  1:365636/1‑150 (MQ=255)                                                                                                     cTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAACAACGCAGACCTACCGATTCTGGCTACCACCCGCCGTTTCGACGGCCCGTTCACCGtt                                                >  2:1143072/1‑149 (MQ=255)                                                                                                      tGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTgg                                               <  2:469341/150‑1 (MQ=255)                                                                                                       taGCCAACTTGGCGGCGACGCTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTggg                                              <  2:678441/149‑1 (MQ=255)                                                                                                               ttGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGc                                      >  2:1078096/1‑150 (MQ=255)                                                                                                                       gagaCTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGAt                                                               <  1:1374157/117‑1 (MQ=255)                                                                                                                       gagaCTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGAt                                                               >  2:1374157/1‑117 (MQ=255)                                                                                                                          aCTCCAATGGACAAACTTATTATTACTGGCGGCGCTCGCCTTGACTGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCAc                           <  1:1161792/150‑1 (MQ=255)                                                                                                                             ccAATGGACAAACTGATTATTACTGGCGGCGCTCGACTTGACGGCGCGGTCCCCGTTTCGGGCGCGAACGACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGAc                        >  1:27760/1‑150 (MQ=255)                                                                                                                              cAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGa                         <  2:1363567/148‑1 (MQ=255)                                                                                                                              cAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGa                         >  1:1363567/1‑148 (MQ=255)                                                                                                                              cAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACa                       >  2:887615/1‑150 (MQ=255)                                                                                                                                aTGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATc                     <  1:1322694/150‑1 (MQ=255)                                                                                                                                        aCTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCAt             <  2:366021/150‑1 (MQ=255)                                                                                                                                               ccgaaatGCGGATCTCGCCGTCAAGGCGAGCGCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAg      <  1:567354‑M1/143‑1 (MQ=255)                                                                                                                                               attaCTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAg      >  1:500408/1‑150 (MQ=255)                                                                                                                                                ttaCTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAGc     >  1:718495/1‑150 (MQ=255)                                                                                                                                                ataCTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAGc     >  2:973425/2‑150 (MQ=255)                                                                                                                                                   cTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAGCTGt  >  2:1102061/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                   AGCAGGCGATCTATGCTCACCTGAATCCGTGGATCGCCAATGGCAGCATCCATGCGGTAACCATGAAATTTTTCAGCAGCGCAGCCTGGGCTGAGCGCACCTGAGCCAACTTGGCGGCGAGACTCCAATGGACAAACTGATTATTACTGGCGGCGCTCGCCTTGACGGCGAGATCCGCATTTCGGGCGCGAAAAACGCAGCCCTGCCGATTCTGGCAGCCACCCTGCTGGCCGATGGCCCGGTCACCGTGGGCAACCTGCCGCACCTGCACGACATCACCACCATGATCGAGCTGT  >  NC_002947/1103120‑1103415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.