New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1518118 =	52 (0.990)	3 (0.060)	3/236	NT	5.8%	coding (1266/1491 nt)	murE	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase
	?	NC_002947	1518189 =	48 (0.950)					coding (1337/1491 nt)	murE	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase

GCCATTGATCTCCTGGTAATCCTCGTGCCCCTTGCCGGCCAGCACGATCACATCGTTGGCAGCAGCGGTGGCAATCAGGTGCGCGATGGCTTCGCCACGGCCGGCGACGAACTCGACGTCGTCAGGCCTGGTGAAACCGGGGCGAATGTCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1518271‑1518118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgCGCACCTGATTGCCACCGCTGCTGCCAACGATGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATC  >  NC_002947/1518189‑1518265                                                                                                                                                                                                                                         GCCATTGATCTCCTTGTAATCCTCGTGCCCCTTGCCGGCCAGCACGATCACATCGTTGGCAGCAGCGGTGGCAATCAGGTGCGCGATGGCTTCGCCACGGCCGGCGACGAACTCGACGTCGTCAGGCCTGGTGAAACCGGGGCGAATGTC                                                                                   >  2:20156/1‑150   CATTGATCTCCTGGTAATCCTCGTGCCCCTTGCCGGCCAGCACGATCACATCGTTGGCAGCAGCGGTGGCAATCAGGTGCGCGATGGCTTCGCCACGGCCGGCGACGAACTCGACGTCGTCAGGCCTGGTGAAACCGGGGCGAATGTCAT                                                                                 <  2:578017/150‑1   CATTGATCTCCTGGTAATCCTCGTGCCCCTTGCCGGCCAGCACGATCACATCGTTGGCAGCAGCGGTGGCAATCAGGTGCGCGATGGCTTCGCCACGGCCGGCGACGAACTCGACGTCGTCAGGCCTGGTGAAACCGGGGCGAATGTCAT                                                                                 >  2:910667/1‑150                                                                                  CGCGATGGCTTCGCCACGGCCGGCGACGAACTCGACGTCGTCAGGCCTGGTGAAACCGGGGCGAATGTCATCGCGCACCTGATTGCCACCGCTGCTGCCAACGATGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATC  >  1:845549/1‑150                                                                                     GATGGCTTCGCCACGGCCGGCGACGAACTCGACGTCGTCAGGCCTGGTGAAACCGGGGCGAATGTCATCGCGCACCTGATTGCCACCGCTGCT                                                        >  1:333601/1‑93                                                                                     GATGGCTTCGCCACGGCCGGCGACGAACTCGACGTCGTCAGGCCTGGTGAAACCGGGGCGAATGTCATCGCGCACCTGATTGCCACCGCTGCT                                                        <  2:333601/93‑1                                                                                                                                                                                                                                         GCCATTGATCTCCTGGTAATCCTCGTGCCCCTTGCCGGCCAGCACGATCACATCGTTGGCAGCAGCGGTGGCAATCAGGTGCGCGATGGCTTCGCCACGGCCGGCGACGAACTCGACGTCGTCAGGCCTGGTGAAACCGGGGCGAATGTCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1518271‑1518118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcgCGCACCTGATTGCCACCGCTGCTGCCAACGATGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATC  >  NC_002947/1518189‑1518265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.