New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1518118 = | 52 (0.990) | 3 (0.060) | 3/236 | NT | 5.8% | coding (1266/1491 nt) | murE | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
? | NC_002947 | 1518189 = | 48 (0.950) | coding (1337/1491 nt) | murE | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
GAAGTGGCCGAGCGCCTGGCTGACCGCGTACTGGTTACCGACGACAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGACCGAAGCCGAAAAGGCACTTGCAGCCTGGGAGGCTC > NC_002947/1518041‑1518332 | gatctcctggtaatcctcgtgccccttgccggccagcacgatcacatcgttggcagcagcggtggcaatcaggtgcgCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATcgcg > 1:845549‑M1/78‑150 (MQ=255) tGGCTGACCGCGTACTGGTTACCGACGACAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCg > 1:666625/1‑150 (MQ=255) tGACCGCGTACTGGTTACCGACGACAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCg‑ctgc > 1:767205/1‑150 (MQ=255) cTGGTTACCGACGACAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCACCGA‑t < 2:767205/150‑1 (MQ=255) tGGTTACCGACGACAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCAc < 1:723674/133‑1 (MQ=255) tGGTTACCGACGACAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCAc > 2:723674/1‑133 (MQ=255) gTTACCGACGACAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑tgtg > 2:56308/1‑150 (MQ=255) aCCGACGACAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCAAATGATGGCCACCG‑CTGCTGCCAACGA‑TGTGATc < 1:1106583/150‑1 (MQ=255) cgacgaCAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGt > 2:704572/1‑150 (MQ=255) cgacAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCt < 1:1042999/150‑1 (MQ=255) acAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTCCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTgg > 1:894551/1‑150 (MQ=255) aaCCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGcc > 2:567216/1‑150 (MQ=255) aaCCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGcc > 1:910667/1‑150 (MQ=255) ccGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGc > 2:1323037/1‑150 (MQ=255) gTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAgg < 1:1348514/150‑1 (MQ=255) aCTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAgggg < 2:711196/150‑1 (MQ=255) cTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGc > 1:232756/1‑150 (MQ=255) tGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGACGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCa > 1:20156/1‑150 (MQ=255) gAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCAc > 2:1327230/1‑150 (MQ=255) aGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGa < 1:567216/150‑1 (MQ=255) aTCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAgg < 1:170298/150‑1 (MQ=255) aTCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAgg < 1:1327230/150‑1 (MQ=255) ccGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGAt < 2:232756/150‑1 (MQ=255) gTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGGCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTa > 2:541495/1‑150 (MQ=255) tCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTAc < 2:894551/150‑1 (MQ=255) aCGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGa < 1:910927/111‑1 (MQ=255) aCGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGa > 2:910927/1‑111 (MQ=255) aCGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATc > 2:650043/1‑118 (MQ=255) aCGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATc < 1:650043/118‑1 (MQ=255) aCGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCa < 1:704572/150‑1 (MQ=255) cTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCaa < 2:283597/102‑1 (MQ=255) cTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCaa > 1:283597/1‑102 (MQ=255) cTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGAt < 1:685362/150‑1 (MQ=255) cgcgatggcttcgccacggccggcgacgaactcgacgtcgtcaggcctggtgaaaccggggcgaatgtcatcgCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATc > 1:845549‑M2/74‑150 (MQ=255) gatggcttcgccacggccggcgacgaactcgacgtcgtcaggcctggtgaaaccggggcgaatgtcatcgCGCACCTGATTGCCACCg‑ctgct > 1:333601‑M2/71‑93 (MQ=255) gatggcttcgccacggccggcgacgaactcgacgtcgtcaggcctggtgaaaccggggcgaatgtcatcgCGCACCTGATTGCCACCg‑ctgct < 2:333601‑M2/23‑1 (MQ=255) ATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATg > 2:910667‑M1/1‑150 (MQ=255) ATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATg < 2:578017‑M1/150‑1 (MQ=255) GACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACAAGGAGATCAATGGc > 2:20156‑M1/1‑150 (MQ=255) cccGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCAt > 1:1225851/1‑150 (MQ=255) cccGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCAt > 1:702414/1‑150 (MQ=255) cACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTtctc < 1:56308/150‑1 (MQ=255) ccAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑t > 2:542659/1‑80 (MQ=255) ccAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑t < 1:542659/80‑1 (MQ=255) ccAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCg > 1:1004628/1‑150 (MQ=255) cAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTccca < 2:723998/150‑3 (MQ=255) tGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGAc > 2:22230/1‑150 (MQ=255) gacgacGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGAcc > 2:64196/1‑150 (MQ=255) acgacgTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAGTAGCGAGCGCCATGAGGTCTCCGATTTGACCg > 2:373396/1‑150 (MQ=255) gTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCCTGTAATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGACCGAAGcc < 1:373396/150‑1 (MQ=255) tCGAGTTCGTCGCCGCCCGTGGCCAAGCCATCGCGCCCGTGATTGCCACCG‑CTGCTGCCAACGT‑TGTGATCGTGCTGGCCGGCAAGGGGAACGAGGATTACAAGGAGATCAAATGCCAGCGCACTGATTTTTACGATTTGACAGAAACCg > 2:278017/1‑150 (MQ=255) gccgTGGCGAAGCCATCGCGCACCTGATTG‑CACCGACTGC‑GCGGGCGAGGGTGAGGGTGCTGGCCGGCAATGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGCCTTGACCGAAGCCGAAAAGGCACTTGCAg < 2:666625/150‑1 (MQ=255) tGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGACCGAAGCCGAAAAGGCACTTGCAGCCTg < 2:1004628/150‑1 (MQ=255) cGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAgg < 2:771219/83‑1 (MQ=255) cGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAgg > 1:771219/1‑83 (MQ=255) gAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGACCGAAGCCGAAAAGGCACTTGCAGCCTGGGAg > 2:1388043/1‑150 (MQ=255) aGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGACCGAAGCCGAAAAGGCACTTGCAGCCTgg < 1:628190/145‑1 (MQ=255) aGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGACCGAAGCCGAAAAGGCACTTGCAGCCTgg > 2:628190/1‑145 (MQ=255) ccATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGACCGAAGCCGAAAAGGCACTTGCAGCCTGGGAGGCTc < 1:1323037/150‑1 (MQ=255) | GAAGTGGCCGAGCGCCTGGCTGACCGCGTACTGGTTACCGACGACAACCCGCGTACTGAAGATCCGTCACGCATCTTCGATGACATTCGCCCCGGTTTCACCAGGCCTGACGACGTCGAGTTCGTCGCCGGCCGTGGCGAAGCCATCGCGCACCTGATTGCCACCG‑CTGCTGCCAACGA‑TGTGATCGTGCTGGCCGGCAAGGGGCACGAGGATTACCAGGAGATCAATGGCGAGCGCCATGATTTCTCCGATTTGACCGAAGCCGAAAAGGCACTTGCAGCCTGGGAGGCTC > NC_002947/1518041‑1518332 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |