New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1700018 | 53 (1.010) | 6 (0.120) | 6/236 | NT | 10.9% | coding (662/1008 nt) | PP_1494 | GGDEF domain‑containing response regulator |
? | NC_002947 | = 1700047 | 47 (0.930) | coding (691/1008 nt) | PP_1494 | GGDEF domain‑containing response regulator |
GAACTCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1699866‑1700018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCCTGGCGCAAGGCCTCGTCACCGGCCAGATGGCCAAAGCTGTCGTTGTAGACTTTGAAGTAATCCACGTCGATCATCAGCAACGACAACTGCTGCTGTTCACGCATGGCCCGGCGCCACTCCAGCTCCAGGTACTCGTCAAAGTGGC < NC_002947/1700047‑1699901 GAACTCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGG < 2:901287/150‑1 AACTCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGC > 1:229998/1‑150 ACTCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCC > 2:928369/1‑150 CTCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTGTACAACGACAGCTTTGGCCA > 1:783923/1‑150 CGCCACTTGGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTCGGCCACCTGGCGCAAGGCCTCGTCACCGGCCAGATG < 2:319118/150‑1 TTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCACCTGGCGCAAGGCCTCGTCACCGGCCAGATGGCCAAAG < 1:928369/150‑1 GCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCACCTGGCGCAAGGCCTCGTCACCGGCCAGATGGCC < 1:1151937/119‑1 GCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCACCTGGCGCAAGGCCTCGTCACCGGCCAGATGGCC > 2:1151937/1‑119 CAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCACCTGGCGCAAGGCCTCGTCACCGGCCAGATGG < 1:579776/100‑1 CAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCACCTGGCGCAAGGCCTCGTCACCGGCCAGATGG > 2:579776/1‑100 GCCACCTGGCGCAAGGCCTCGTCACCGGCCAGATGGCCAAAGCTGTCGTTGTAGACTTTGAAGTAATCCACGTCGATCATCAGCAACGACAACTGCTGCTGTTCATGCATGGCCCGGCGCCACTCCAGCTCCAGGTACTCGTCAAAGTGG < 2:1256967/150‑1 GCCACCTGGCGCAAGGCCTCGTCACCGGCCAGATGGCCAAAGCTGTCGTTGTAGACTTTGAAGTAATCCACGTCGATCATCAGCAACGACAACTGCTGCTGTTCACGCATGGCCCGGCGCCACTCCAGCTCCAGGTACTCGTCAAAGTGG < 1:1367372/150‑1 CCACCTGGCGCAAGGCCTCGTCACCGGCCAGATGGCCAAAGCTGTCGTTGTAGACTTTGAAGTAATCCACGTCGATCATCAGCAACGACAACTGCTGCTGTTCACGCATGGCCCGGCGCCACTCCAGCTCCAGGTACTCGTCAAAGTGGC < 2:789059/150‑1 GAACTCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1699866‑1700018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCCTGGCGCAAGGCCTCGTCACCGGCCAGATGGCCAAAGCTGTCGTTGTAGACTTTGAAGTAATCCACGTCGATCATCAGCAACGACAACTGCTGCTGTTCACGCATGGCCCGGCGCCACTCCAGCTCCAGGTACTCGTCAAAGTGGC < NC_002947/1700047‑1699901 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |