New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 170001853 (1.010)6 (0.120) 6/236 NT 10.9% coding (662/1008 nt) PP_1494 GGDEF domain‑containing response regulator
?NC_002947 = 1700047 47 (0.930)coding (691/1008 nt) PP_1494 GGDEF domain‑containing response regulator

GCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGCCGAAAAACTGCGCCAGACCGTGCTGGGC  >  NC_002947/1699901‑1700193
                                                                                                                                                   |                                                                                                                                                  
gCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtgg                                                                                                                                                 <  2:789059‑M2/150‑4 (MQ=255)
 ccACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggc                                                                                                                                                <  1:1367372‑M2/150‑5 (MQ=255)
 ccACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCATGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggc                                                                                                                                                <  2:1256967‑M2/150‑5 (MQ=255)
     tttGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGaa                                                                                                                                            >  1:634847/1‑150 (MQ=255)
     tttGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGaa                                                                                                                                            <  2:1367372/150‑1 (MQ=255)
     tttGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGAAACCAAGCCTTTCGCCATGTGGCCGaa                                                                                                                                            <  2:1195411/150‑1 (MQ=255)
      ttGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAg                                                                                                                                           <  2:624337/150‑1 (MQ=255)
             gTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCg                                                                                                                                    >  2:1019639/1‑150 (MQ=255)
                ccTGGAGCTGGAGTGGCGCCGGGCCATGCATGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAg                                                                                                                                 <  1:1256967/150‑1 (MQ=255)
                     ggcgggagTGGCGCCGGTCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAGCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGt                                                                                                                            <  2:71766/146‑1 (MQ=255)
                      gctggagTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTg                                                                                                                           >  1:501228/1‑150 (MQ=255)
                                                     cagcagTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTAt                                                                                            <  1:789059/150‑1 (MQ=255)
                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCt                                                                                              >  2:35888/1‑142 (MQ=255)
                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCt                                                                                              <  1:35888/142‑1 (MQ=255)
                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATggcggc                                                                                      <  1:363662/150‑1 (MQ=255)
                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATggcggc                                                                                      <  1:1019639/150‑1 (MQ=255)
                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCGACAACGACAGCTTTGGGCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATggcggc                                                                                      >  1:762237/1‑150 (MQ=255)
                                                                gTTGCTGATTATCGACGGCGATTACTTCAACGTCTGCAACGACAGCTTTGGCCATCTCGGCCGGGACGAGGCCTTGCCCCCGGGGGCCAGAGTCATCCTTATCTCGGGCGCGCGGCAGCCCGCCCTGCCGGCGCGCTATAGCGGCGCaga                                                                                 <  2:40891/150‑1 (MQ=255)
                                                                gTTGCTGATGATCGACGTGGATTACTTCAAAGTCTCACTTTACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAaga                                                                                 <  1:785596/150‑1 (MQ=255)
                                                                   gCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGCTGCATACGAGATCAGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGtt                                                                              <  1:1315420/150‑1 (MQ=255)
                                                                    ctcgggatCGACTTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTACCGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGttt                                                                             <  1:733278/145‑1 (MQ=255)
                                                                    cTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGttt                                                                             >  1:669740/1‑150 (MQ=255)
                                                                       atgatCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGcc                                                                          >  1:372363/1‑150 (MQ=255)
                                                                             gACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGtg                                                                    >  1:1267401/1‑150 (MQ=255)
                                                                              aCGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGc                                                                                                                                          <  2:642559/79‑1 (MQ=255)
                                                                              aCGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGc                                                                                                                                          >  1:642559/1‑79 (MQ=255)
                                                                              aCGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGtgc                                                                   >  1:973153/1‑150 (MQ=255)
                                                                                  ggATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGcc                                                               >  1:1007019/1‑150 (MQ=255)
                                                                                   gATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGccc                                                              <  2:501228/150‑1 (MQ=255)
                                                                                         ttCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACAcc                                                        >  1:1264957/1‑150 (MQ=255)
                                                                                         ttCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACAcc                                                        >  2:1036306/1‑150 (MQ=255)
                                                                                          tCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCt                                                       >  1:97581/1‑150 (MQ=255)
                                                                                           cAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCcgaccgac                                                                                                           >  1:785105/1‑97 (MQ=255)
                                                                                           cAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCcgaccgac                                                                                                           <  2:785105/97‑1 (MQ=255)
                                                                                             aaGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGc                                                    >  2:780556/1‑150 (MQ=255)
                                                                                                  tACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGc                                               >  2:588771/1‑150 (MQ=255)
                                                                                                     aaCGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGgcgcg                                                                                                >  2:530562/1‑98 (MQ=255)
                                                                                                     aaCGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGgcgcg                                                                                                <  1:530562/98‑1 (MQ=255)
                                                                                                       cGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgc                                          <  2:372363/150‑1 (MQ=255)
                                                                                                        gACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgcg                                         >  2:51350/1‑150 (MQ=255)
                                                                                                        gACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgcg                                         >  1:1297451/1‑150 (MQ=255)
                                                                                                        gACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgcg                                         >  1:1013466/1‑150 (MQ=255)
                                                                                                         actgCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGACGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgcgc                                        >  1:1424902/4‑150 (MQ=255)
                                                                                                           aGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCgg                                      <  1:42094/150‑1 (MQ=255)
                                                                                                             cTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggcgccactccagctccaggtactcgtcaa                                    <  1:928369‑M2/150‑113 (MQ=255)
                                                                                                              tttGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCtg                                   <  2:991226/150‑1 (MQ=255)
                                                                                                              tttGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCtg                                   >  1:991226/1‑150 (MQ=255)
                                                                                                              tgtGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCTCGGGCGTCCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGAGCGCGGCtg                                   <  2:44777/148‑1 (MQ=255)
                                                                                                                 ggCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggc                                                               >  2:1151937‑M2/1‑34 (MQ=255)
                                                                                                                 ggCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggc                                                               <  1:1151937‑M2/119‑86 (MQ=255)
                                                                                                                   ccATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctg                                                                                >  2:579776‑M2/1‑32 (MQ=255)
                                                                                                                   ccATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctg                                                                                <  1:579776‑M2/100‑69 (MQ=255)
                                                                                                                   ccATCTGCCCGGTGACGAAGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTTCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGc                              <  1:690438/150‑1 (MQ=255)
                                                                                                                    cATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccgaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggcgccactccagctccaggtactcgtccaagtggcg                             <  2:319118‑M2/150‑120 (MQ=255)
                                                                                                                    cATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGcc                             <  2:1267401/150‑1 (MQ=255)
                                                                                                                    cATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGcc                             >  1:873397/1‑150 (MQ=255)
                                                                                                                             cGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATggcggc                                                                                      >  1:778937/1‑85 (MQ=255)
                                                                                                                             cGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATggcggc                                                                                      <  2:778937/85‑1 (MQ=255)
                                                                                                                               gTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGCCGAAAAACTgc                   <  1:780556/150‑1 (MQ=255)
                                                                                                                                         cTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGCCGAAAAACTGCGCCAGACCGt         >  2:82987/1‑150 (MQ=255)
                                                                                                                                          ttGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGCCGAAAAACTGCGCCAGACCGTg        >  1:529000/1‑150 (MQ=255)
                                                                                                                                             cgcCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACGTCGCCAGGCGGGGCGCGGCTGGTGGCCGAAAAACTGCGCCAGACCGTGCTg     <  2:1007019/150‑1 (MQ=255)
                                                                                                                                               ccAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGAGCGACCTTCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGCCGAAAAACTGCGCCAGACCGTGCTggg   >  1:604332/1‑150 (MQ=255)
                                                                                                                                                cAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGACGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGCCGAAAAACTGCGCCAGACCGTGCTGGGc  <  2:1424902/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGCCGAAAAACTGCGCCAGACCGTGCTGGGC  >  NC_002947/1699901‑1700193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.