New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 170001853 (1.010)6 (0.120) 6/236 NT 10.9% coding (662/1008 nt) PP_1494 GGDEF domain‑containing response regulator
?NC_002947 = 1700047 47 (0.930)coding (691/1008 nt) PP_1494 GGDEF domain‑containing response regulator

CTCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGCC  >  NC_002947/1699869‑1700166
                                                                                                                                                     |                                                                                                                                                     
cTCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTGTACAACGACAGCTTTGGCCA                                                                                                                                                       >  1:783923‑M1/1‑150 (MQ=255)
 tCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAt                                                                                                                                                      >  2:363662/1‑150 (MQ=255)
               cGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGa                                                                                                                                       <  1:1071562/150‑1 (MQ=255)
                 ggCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAgg                                                                                                                                     >  2:916929/1‑150 (MQ=255)
                      tCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTg                                                                                                                                >  2:1167034/1‑150 (MQ=255)
                       ccAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTgc                                                                                                                               <  2:688024/150‑1 (MQ=255)
                         aaCCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGTGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTgcgc                                                                                                                             >  2:42094/1‑150 (MQ=255)
                            cGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAg                                                                                                                          >  1:44777/1‑150 (MQ=255)
                            cGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAg                                                                                                                          <  2:1038903/150‑1 (MQ=255)
                               cGCCACTTGGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTCGGCCAcctggcgcaaggcctcgtcaccggccagatg                                                                                                                        <  2:319118‑M1/150‑32 (MQ=255)
                                gCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtgg                                                                                                                      <  2:789059‑M2/150‑4 (MQ=255)
                                 ccACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggc                                                                                                                     <  1:1367372‑M2/150‑5 (MQ=255)
                                 ccACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCATGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggc                                                                                                                     <  2:1256967‑M2/150‑5 (MQ=255)
                                     tttGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGaa                                                                                                                 <  2:1367372/150‑1 (MQ=255)
                                     tttGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGaa                                                                                                                 >  1:634847/1‑150 (MQ=255)
                                     tttGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGAAACCAAGCCTTTCGCCATGTGGCCGaa                                                                                                                 <  2:1195411/150‑1 (MQ=255)
                                      ttGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAcctggcgcaaggcctcgtcaccggccagatggccaaag                                                                                                                 <  1:928369‑M1/150‑39 (MQ=255)
                                      ttGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAg                                                                                                                <  2:624337/150‑1 (MQ=255)
                                             gTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCg                                                                                                         >  2:1019639/1‑150 (MQ=255)
                                                ccTGGAGCTGGAGTGGCGCCGGGCCATGCATGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAg                                                                                                      <  1:1256967/150‑1 (MQ=255)
                                                  tggagctggagTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCt                                                                                                                                                    >  1:714620/1‑103 (MQ=255)
                                                  tggagctggagTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCt                                                                                                                                                    <  2:714620/103‑1 (MQ=255)
                                                     ggcgggagTGGCGCCGGTCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAGCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGt                                                                                                 <  2:71766/146‑1 (MQ=255)
                                                      gctggagTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTg                                                                                                >  1:501228/1‑150 (MQ=255)
                                                                 gcCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAcctggcgcaaggcctcgtcaccggccagatggcc                                                                                                                     >  2:1151937‑M1/1‑85 (MQ=255)
                                                                 gcCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAcctggcgcaaggcctcgtcaccggccagatggcc                                                                                                                     <  1:1151937‑M1/119‑35 (MQ=255)
                                                                        cATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCt                                                                                                                                                    >  2:1217249/1‑81 (MQ=255)
                                                                        cATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCt                                                                                                                                                    <  1:1217249/81‑1 (MQ=255)
                                                                             gTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAt                                                                                                                                                      <  2:611267/74‑1 (MQ=255)
                                                                             gTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAt                                                                                                                                                      >  1:611267/1‑74 (MQ=255)
                                                                                  cagcagcagTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAcctggcgcaaggcctcgtcaccggccagatgg                                                                                                                       <  1:579776‑M1/100‑33 (MQ=255)
                                                                                  cagcagcagTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCAcctggcgcaaggcctcgtcaccggccagatgg                                                                                                                       >  2:579776‑M1/1‑68 (MQ=255)
                                                                                     cagcagTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTAt                                                                 <  1:789059/150‑1 (MQ=255)
                                                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCt                                                                   <  1:35888/142‑1 (MQ=255)
                                                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCt                                                                   >  2:35888/1‑142 (MQ=255)
                                                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATggcggc                                                           <  1:1019639/150‑1 (MQ=255)
                                                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATggcggc                                                           <  1:363662/150‑1 (MQ=255)
                                                                                           ttGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCGACAACGACAGCTTTGGGCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATggcggc                                                           >  1:762237/1‑150 (MQ=255)
                                                                                              tCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTgc                                                                                                                               <  1:39023/79‑1 (MQ=255)
                                                                                              tCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTgc                                                                                                                               >  2:39023/1‑79 (MQ=255)
                                                                                                gTTGCTGATTATCGACGGCGATTACTTCAACGTCTGCAACGACAGCTTTGGCCATCTCGGCCGGGACGAGGCCTTGCCCCCGGGGGCCAGAGTCATCCTTATCTCGGGCGCGCGGCAGCCCGCCCTGCCGGCGCGCTATAGCGGCGCaga                                                      <  2:40891/150‑1 (MQ=255)
                                                                                                gTTGCTGATGATCGACGTGGATTACTTCAAAGTCTCACTTTACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAaga                                                      <  1:785596/150‑1 (MQ=255)
                                                                                                   gCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGCTGCATACGAGATCAGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGtt                                                   <  1:1315420/150‑1 (MQ=255)
                                                                                                    ctcgggatCGACTTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTACCGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGttt                                                  <  1:733278/145‑1 (MQ=255)
                                                                                                    cTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGttt                                                  >  1:669740/1‑150 (MQ=255)
                                                                                                       atgatCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGcc                                               >  1:372363/1‑150 (MQ=255)
                                                                                                             gACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGtg                                         >  1:1267401/1‑150 (MQ=255)
                                                                                                              aCGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGc                                                                                                               <  2:642559/79‑1 (MQ=255)
                                                                                                              aCGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGc                                                                                                               >  1:642559/1‑79 (MQ=255)
                                                                                                              aCGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGtgc                                        >  1:973153/1‑150 (MQ=255)
                                                                                                                  ggATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGcc                                    >  1:1007019/1‑150 (MQ=255)
                                                                                                                   gATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGccc                                   <  2:501228/150‑1 (MQ=255)
                                                                                                                         ttCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACAcc                             >  2:1036306/1‑150 (MQ=255)
                                                                                                                         ttCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACAcc                             >  1:1264957/1‑150 (MQ=255)
                                                                                                                          tCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCt                            >  1:97581/1‑150 (MQ=255)
                                                                                                                           cAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCcgaccgac                                                                                >  1:785105/1‑97 (MQ=255)
                                                                                                                           cAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCcgaccgac                                                                                <  2:785105/97‑1 (MQ=255)
                                                                                                                             aaGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGc                         >  2:780556/1‑150 (MQ=255)
                                                                                                                                  tACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGc                    >  2:588771/1‑150 (MQ=255)
                                                                                                                                     aaCGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGgcgcg                                                                     >  2:530562/1‑98 (MQ=255)
                                                                                                                                     aaCGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGgcgcg                                                                     <  1:530562/98‑1 (MQ=255)
                                                                                                                                       cGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgc               <  2:372363/150‑1 (MQ=255)
                                                                                                                                        gACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgcg              >  2:51350/1‑150 (MQ=255)
                                                                                                                                        gACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgcg              >  1:1013466/1‑150 (MQ=255)
                                                                                                                                        gACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgcg              >  1:1297451/1‑150 (MQ=255)
                                                                                                                                         actgCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGACGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGgcgc             >  1:1424902/4‑150 (MQ=255)
                                                                                                                                           aGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCgg           <  1:42094/150‑1 (MQ=255)
                                                                                                                                             cTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggcgccactccagctccaggtactcgtcaa         <  1:928369‑M2/150‑113 (MQ=255)
                                                                                                                                              tttGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCtg        <  2:991226/150‑1 (MQ=255)
                                                                                                                                              tttGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCtg        >  1:991226/1‑150 (MQ=255)
                                                                                                                                              tgtGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCTCGGGCGTCCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGAGCGCGGCtg        <  2:44777/148‑1 (MQ=255)
                                                                                                                                                 ggCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggc                                    <  1:1151937‑M2/119‑86 (MQ=255)
                                                                                                                                                 ggCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggc                                    >  2:1151937‑M2/1‑34 (MQ=255)
                                                                                                                                                  gCCAcctggcgcaaggcctcgtcaccggccagatggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcatgcatggcccggcgccactccagctccaggtactcgtcaaagtgg     <  2:1256967‑M1/150‑147 (MQ=255)
                                                                                                                                                  gCCAcctggcgcaaggcctcgtcaccggccagatggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggcgccactccagctccaggtactcgtcaaagtgg     <  1:1367372‑M1/150‑147 (MQ=255)
                                                                                                                                                   ccAcctggcgcaaggcctcgtcaccggccagatggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggcgccactccagctccaggtactcgtcaaagtggc    <  2:789059‑M1/150‑148 (MQ=255)
                                                                                                                                                   ccATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctg                                                     >  2:579776‑M2/1‑32 (MQ=255)
                                                                                                                                                   ccATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccaaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctg                                                     <  1:579776‑M2/100‑69 (MQ=255)
                                                                                                                                                   ccATCTGCCCGGTGACGAAGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTTCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGc   <  1:690438/150‑1 (MQ=255)
                                                                                                                                                    cATCTGGCCGGTGACGAGGCCTTGCGCCAGGtggccgaagctgtcgttgtagactttgaagtaatccacgtcgatcatcagcaacgacaactgctgctgttcacgcatggcccggcgccactccagctccaggtactcgtccaagtggcg  <  2:319118‑M2/150‑120 (MQ=255)
                                                                                                                                                    cATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGcc  >  1:873397/1‑150 (MQ=255)
                                                                                                                                                    cATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGcc  <  2:1267401/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTCCGATGGCCTGACCGGGCTGTCCAACCGTCGCCACTTTGACGAGTACCTGGAGCTGGAGTGGCGCCGGGCCATGCGTGAACAGCAGCAGTTGTCGTTGCTGATGATCGACGTGGATTACTTCAAAGTCTACAACGACAGCTTTGGCCATCTGGCCGGTGACGAGGCCTTGCGCCAGGTGGCCGAAGCCATCCGTAGCTCGTGCTCGCGGCCGACCGACCTGCCGGCGCGCTATGGCGGCGAAGAGTTTGCCCTGGTGCTGCCCAACACCTCGCCAGGCGGGGCGCGGCTGGTGGCC  >  NC_002947/1699869‑1700166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.