| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1930420 = | 22 (0.420) | 9 (0.210) | 7/204 | NT | 38.9% | intergenic (‑45/+60) | PP_1729/apeB | hypothetical protein/M18 family aminopeptidase |
| ? | NC_002947 | 1930478 = | 10 (0.230) | intergenic (‑103/+2) | PP_1729/apeB | hypothetical protein/M18 family aminopeptidase | |||||
GTTTGCCGACCTTTGCCATGCACTCCATTCGCGAGCTGTGTGGCAGCCATGACCTGGCGCACCTGGTGAAGGTACTGACCGCGTTCTACCGTAGCCGCGAGCTGCCTTGATGTAAGCAGGCGCGGCCTGTTCGCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1930589‑1930420‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaacaggccgcgcctgcttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCG > NC_002947/1930478‑1930624 GTTTGCCGACCTTTGCCATGCACTCCATTCGCGAGCTGTGTGGCAGCCATGACCTGGCGCACCTGGTGAAGGTACTGACCGCGTTCTACCGTAGCCGCGAGCTGCCTTGATGTAAGCAGGCGCGGCCTGTTCGCGGCGGTTCGACGCCTC < 1:261511/150‑1GTTTGCCGACCTTTGCCATGCACTCCATTCGCGAGCTGTGTGGCAGCCATGACCTGGCGCACCTGGTGAAGGTACTGACCGCGTTCTACCGTAGCCGCGAGCTGCCTTGATGTAAGCAGGCGCGGCCTGTTCGCGGCGGTTCGACGCCTC < 1:722265/150‑1 CCGACCTTTGCCATGCACTCCATTCGCGAGCTGTGTGGCAGCCATGACCTGGCGCACCTGGTGAAGGTACTGACCGCGTTCTACCGTAGCCGCGAGCTGCCTTGATGTAAGCAGGCGCGGCCTGTTCGCGGCGGTTCGACGCCTCGAACA < 2:746007/150‑1 CCGACCTTTGCCATGCACTCCATTCGCGAGCTGTGTGGCAGCCATGACCTGGCGCACCTGGTGAAGGTACTGACCGCGTTCTACCGTAGCCGCGAGCTGCCTTGATGTAAGCAGGCGCGGCCTGTTCGCGGCGGTTCGACGCCTCGAACA < 1:137662/150‑1 ACCTTTGCCATGCACTCCATTCGCGAGCTGTGTGGCAGCCATGACCTGGCGCACCTGGTGAAGGTACTGACCGCGTTCTACCGTAGCCGCGAGCTGCCTTGATGTAAGCAGGCGCGGCCTGTTCGCGGCGGTTCGACGCCTCGAACAGGC > 1:162576/1‑150 GGCGCACCTGGTGAAGGTACTGACCGCGTTCTACCGTAGCCGCGAGCTGCCTTGATGTAAGCAGGCGCGGCCTGTTCGCGGCGGTTCGACGCCTC > 2:732696/1‑95 GGCGCACCTGGTGAAGGTACTGACCGCGTTCTACCGTAGCCGCGAGCTGCCTTGATGTAAGCAGGCGCGGCCTGTTCGCGGCGGTTCGACGCCTC < 1:732696/95‑1 CTGTTCGCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCG > 1:1354909/1‑150 CTGTTCGCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCG > 2:153662/1‑150 CTGTTCGCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCT > 1:1249169/1‑57 CTGTTCGCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCT < 2:1249169/57‑1 TGTTCGCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTC < 2:194355/123‑1 TGTTCGCGGCAGTTCGACGCCTCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTC > 1:194355/1‑123 TTCGCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAA < 2:937635/70‑1 TTCGCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAA > 1:937635/1‑70 GCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTAGGCAAAC > 1:1021847/1‑150 TTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCG < 1:153662/150‑1 TTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTCCGCACACCCAGGTGGCTGGCG > 2:204723/1‑150 TTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTA > 2:1130032/1‑43 TTACATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTA < 1:1130032/43‑1 GTTTGCCGACCTTTGCCATGCACTCCATTCGCGAGCTGTGTGGCAGCCATGACCTGGCGCACCTGGTGAAGGTACTGACCGCGTTCTACCGTAGCCGCGAGCTGCCTTGATGTAAGCAGGCGCGGCCTGTTCGCGGCGGTTCGACGCCTCGAACAGGCCGCGCCTGCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1930589‑1930420‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaacaggccgcgcctgcttaCATCAAGGCAGCTCGCGGCTACGGTAGAACGCGGTCAGTACCTTCACCAGGTGCGCCAGGTCATGGCTGCCACACAGCTCGCGAATGGAGTGCATGGCAAAGGTCGGCAAACCGATATCCACCGTGCGCACACCCAGGTGGCTGGCG > NC_002947/1930478‑1930624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |